LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4443g00024	ATGCAGGATCAGGATGACCCTCCACCTCCTTTAGCAGCATGTCCAAGGGTTCAGCTCCCAGTGAATATGCTGGCTTTCTCTCCTGATCCCTTTACATTCATAGCTTCTGAATTTCGTGTTGGTATTCAGCTTTCTCCTGGTTGTGCTCAATGTCTTTTTGACAAAGGCTCATGCCGTCTCAACAGCACCAGAGAATTTTATTGTCTCAAAGAAAGACGGGCTGGGAAGCTGGGATTGAAGATAGGTGTTGGAGTGGGATCAGGCATTCTGATATTAGCGTTGCTGCTCTGCTTCGGACTCTACAAACACAAACAGAATGCTATATCCCATGTCAGACTTCGATCAACGAATCAACACCCAAATGATGTAGACCCAGACAGTGGTAGGCTCTTCTTTGGAGTCCCAATCTTCTCCTACACAGAGCTTCAAGGCGCAACCAACAGCTTTGACCCCTCCAAGAAACTTGGAGACGGCGGCTTCGGCTCTGTTTACTATGGAAAGCTCCAAGATGGGCGTGAAGTTGCAGTGAAGCACCTATTCAACCACAACTACAAGCGAGTAGAACAGTTCATGACAGAGGTTGAGATCCTCACTCGCCTGCGTCACAGAAATCTTGTCTGCCTCTATGGCTGCACTTCGCGTCAAAGCCAAGAGCTCCTTCTTGTCTATGAATACATCCCAAATGGCACCCTTGCCAGTCACCTCCGTGGCAGCTCTGCAAATCCTGCATTGTTGACGTGGCCTGTTCGAATCAAAATCGCCATAGAAACTGCCAGTGCTTTGGCTTACCTTCATGCCTCCGGCATCATCCATCGTGATGTCAAAACCAACAACATTCTTCTTGACAAGAACTTCTGTGTTAAGGTTGCAGATTTTGGACTTTCTAGGTTGTTCCCAGATGATGTCTCGCATGTTTCTACGGCTCCACAAGGAACACCAGGCTATCTTGACCCAGAATATCACTATTGCTTTAGGCTTACCGATAAAAGTGACGTGTATAGTTTTGGGGTTGTGCTTATGGAGCTGATATCTTCTATGCCAGCGATTGATATGGGAAGGAACAAAGATGAGATTACCTTGGCGAGTCTTACAACTAGAAAGATTCAGAGGAATGAATTTGAGGAGTTGGTGGATCCATGTTTGGGGATTGAGAAGGATAGTGAGGTGAAAAAGAAGGTGTTTGCAGTGGGAGAATTGGCATTCCAGTGTTTGCAGATAGATAAAGAGATGAGGCCTTCCATTGATGAGGTTTTAGAGCTTTTGAGGAATATCGAAGGTGGGAAAGTAGAAGAAGAAGAAAAAGAGAAGGATACCGGGAAAGACGAAGGTGGTGGTGAAGTTTCAAAGAATAAAGCAGATATAAAAGCACAAGCAATGACTTCAATAAGCTTTGATTAG	1398	0.4535	MQDQDDPPPPLAACPRVQLPVNMLAFSPDPFTFIASEFRVGIQLSPGCAQCLFDKGSCRLNSTREFYCLKERRAGKLGLKIGVGVGSGILILALLLCFGLYKHKQNAISHVRLRSTNQHPNDVDPDSGRLFFGVPIFSYTELQGATNSFDPSKKLGDGGFGSVYYGKLQDGREVAVKHLFNHNYKRVEQFMTEVEILTRLRHRNLVCLYGCTSRQSQELLLVYEYIPNGTLASHLRGSSANPALLTWPVRIKIAIETASALAYLHASGIIHRDVKTNNILLDKNFCVKVADFGLSRLFPDDVSHVSTAPQGTPGYLDPEYHYCFRLTDKSDVYSFGVVLMELISSMPAIDMGRNKDEITLASLTTRKIQRNEFEELVDPCLGIEKDSEVKKKVFAVGELAFQCLQIDKEMRPSIDEVLELLRNIEGGKVEEEEKEKDTGKDEGGGEVSKNKADIKAQAMTSISFD	465

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4443g00024	465	PANTHER	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4	14	439	IPR044652	GO:0004672
	Pral4443g00024	465	CDD	STKc_IRAK	155	424	-	-
	Pral4443g00024	465	MobiDBLite	consensus disorder prediction	428	449	-	-
	Pral4443g00024	465	Gene3D	Phosphorylase Kinase; domain 1	126	225	-	-
	Pral4443g00024	465	SUPERFAMILY	Protein kinase-like (PK-like)	131	421	IPR011009	-
	Pral4443g00024	465	Pfam	Protein tyrosine and serine/threonine kinase	152	420	IPR001245	GO:0004672\|GO:0006468
	Pral4443g00024	465	PRINTS	Tyrosine kinase catalytic domain signature	330	352	IPR001245	GO:0004672\|GO:0006468
	Pral4443g00024	465	PRINTS	Tyrosine kinase catalytic domain signature	263	281	IPR001245	GO:0004672\|GO:0006468
	Pral4443g00024	465	PRINTS	Tyrosine kinase catalytic domain signature	223	236	IPR001245	GO:0004672\|GO:0006468
	Pral4443g00024	465	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	269	281	IPR008271	GO:0004672\|GO:0006468
	Pral4443g00024	465	ProSitePatterns	Protein kinases ATP-binding region signature.	155	177	IPR017441	GO:0005524
	Pral4443g00024	465	MobiDBLite	consensus disorder prediction	428	465	-	-
	Pral4443g00024	465	Gene3D	Transferase(Phosphotransferase) domain 1	226	439	-	-
	Pral4443g00024	465	SMART	serkin_6	149	421	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4443g00024	465	ProSiteProfiles	Protein kinase domain profile.	149	424	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4443g00024	465	FunFam	Wall-associated receptor kinase-like 20	226	434	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4443g00024	Pral-Chr4443	312837	314806	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4443g00024	11	434	Receptor kinase-like Gene Family	AT1G25390	51.756	1.03e-147	434

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK_LRK10L-1	Pral4443g00024		PK_Tyr_Ser-Thr	1.6e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4443g00024	-		-	rcu:8271488	491.5