Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4443g00023 ATGTTAGCTTTGCTGCTCTGCTTCGGACTCTACAAGCACAAACAGAATGTTGTGTCCCATGTCAGACTCCGATCAACAAATCAATACCCAAGTGATGCAGACCCAGACAGTGGCAGACTCTTCTTTGGAGTCCCAATCTTCTCCTACACGGAGCTTCAAGGCGCAACCAATAACTTTGACCCTTCCAACAAACTCGGAGATGGAGGCTTCGGCTCTGTTTTCTATGGGAAGCTTCAAGATGGGCGTGAAGTTGCAGTGAAACACCTATTCAACCATAACTACAAGCGAGTGGAACAGTTTATGACCGAAGTTGAGATCCTCACTCGCCTGCGTCACAGAAATCTTGTTTGCCTCTATGGCTGTACTTCACGACAGAGCTGTGAGCTCCTTCTTGTCTATGAATACATCCCAAATGGCACTCTTGCCAGTCACCTACATGGCCACTCTGCCAATCCTACATTGCTGACGTGGCTTATTCGAATCAAAATCGCCATAGAAATTGCCAGTGCTTTGGCTTATCTTCATGCTTCTGGCATCATCCACCGTGATGTCAAAACCAACAACATTCTCCTTGACAAGAACTTTTGTGTTAAGGTTGCTGATTTTGGACTCTCTAGGTTGTTCCCAGATGACGCCTCACATGTCTTTACAACTCCACAAGGAACACCAGGCTATCTTGACCCAGAATATCACTATTGTTTTAGGCTAACCGATAAAAGTGATGTGTATAGTTTTGGGGTTGTGCTTATGGAGCTGATATCTTCAATGCCAGCGGTTGATATGAGAAGGAACAAAGATGAGATTATGTTGGCGAGTCTTGCAGTTAGGAAGATTCAGAGGAATGAATTTGAGGAGTTGGTGGATCCATGTTTTGGGGTTGAGAAGGATGGTGAGGTGAAGAAGAAGGTGTTTGCAGTGGGAGAATTGGCATTTCAGTGTTTGCAGATAGATAAAGAGATGAGGCCTTCCATTGATGAGGTTTTAGAGATTTTGAGGAAAATTGAAGGCGGGAAAGTAGAAGAAGAAGACAAGGATACAGGGAAAGACGGAAATGGTGGTGAAGTTTCAAAGAATACAGCAGATATACAAGCACAAGCAATGACTTCAATAAACTTTGATCAGATAAGGTTGTTCAAGTCAGCATCTTCTCCAAACAACATGATCCAAAAATGGAGAAATGGAAAAGTTGATCAAGCAAAATTGTTTAGCATTTAA 1215 0.4313 MLALLLCFGLYKHKQNVVSHVRLRSTNQYPSDADPDSGRLFFGVPIFSYTELQGATNNFDPSNKLGDGGFGSVFYGKLQDGREVAVKHLFNHNYKRVEQFMTEVEILTRLRHRNLVCLYGCTSRQSCELLLVYEYIPNGTLASHLHGHSANPTLLTWLIRIKIAIEIASALAYLHASGIIHRDVKTNNILLDKNFCVKVADFGLSRLFPDDASHVFTTPQGTPGYLDPEYHYCFRLTDKSDVYSFGVVLMELISSMPAVDMRRNKDEIMLASLAVRKIQRNEFEELVDPCFGVEKDGEVKKKVFAVGELAFQCLQIDKEMRPSIDEVLEILRKIEGGKVEEEDKDTGKDGNGGEVSKNTADIQAQAMTSINFDQIRLFKSASSPNNMIQKWRNGKVDQAKLFSI 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4443g00023 404 ProSiteProfiles Protein kinase domain profile. 59 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00023 404 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 2 392 IPR044652 GO:0004672
Pral4443g00023 404 Gene3D Transferase(Phosphotransferase) domain 1 136 346 - -
Pral4443g00023 404 CDD STKc_IRAK 65 334 - -
Pral4443g00023 404 Gene3D Phosphorylase Kinase; domain 1 34 135 - -
Pral4443g00023 404 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 42 135 - -
Pral4443g00023 404 SUPERFAMILY Protein kinase-like (PK-like) 44 334 IPR011009 -
Pral4443g00023 404 FunFam Wall-associated receptor kinase-like 20 136 344 - -
Pral4443g00023 404 Pfam Protein tyrosine and serine/threonine kinase 63 330 IPR001245 GO:0004672|GO:0006468
Pral4443g00023 404 ProSitePatterns Protein kinases ATP-binding region signature. 65 87 IPR017441 GO:0005524
Pral4443g00023 404 SMART serkin_6 59 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00023 404 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4443g00023 Pral-Chr4443 258973 260924 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4443g00023 31 335 Receptor kinase-like Gene Family AT1G25390 64.379 3.08e-138 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4443g00023 PK_Tyr_Ser-Thr 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4443g00023 - - gmx:100786779 474.552