Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4443g00022 ATGCTGAAGTTTTCATTAGAGACGCAGATTTACAGAAGCGTCTGGCTTCCAAAGCAATTCTTGGACTATACAGGATGTGGTAAGAGTACTAATGAGACCATCTTCTTCAGAACGCAAGATGAAGATGATACTCCATCTTCTTTAGCAGCATGTCCAAGGGTTCAGGTTCCAGTGAACATGTTGGCTTTCTCTGCTGATCCATTTACATTCATAGCTTCTGAATTCCATGTTAACATTCAACTTTCTCCTGGTTGTGGTCGATGTTGTTTTGAGAAAGGCTTATGCCGGCTCAACAGCACTGGAGGATTTTATTGTCTCAAATTGAAAGAAGATCAAAATAAAAGACGGCCTTGGAAGCTGGGAACCATAATAGGTTTTGGAGTGGGATTAGGCATTCTGATATTAGCGTTGCTGCTCTGCTTTGGACTCTACAAACACAAACAGAATCCTATATCCCATGTAAGACTTCGATCAACGAATCAATACCCAAATGATGCGGACCCAGACAGTGGCAGACTCTTCTTTGGAGTCCCAATCTTCTCCTACACGGAGCTTCAAGGCGCAACCAACAACTTTGACCCCTCTAACAAACTTGGAGACGGCGGCTTCGGCTCTGTTTACTATGGAAAGCTCCAAGATGGGCGTGAAGTTGCAGTAAAACACCTATTCAACCACAACTACAAGAGAGTAGAACAGTTCATGACAGAAGTTGAGATCCTCACTCGCCTGCGTCACCAAAATCTTGTCTGCCTCTATGGCTGCACTTCACGTCAGAGCCGTGAACTCCTTCTTGTCTATGAATACATCCCAAATGGCACCCTTGCCAGTCACCTACGTGGCAACTATGCAAATCCTGCACTGTTGACGTGGCCTATTCGAATCAAAATCGCCATAGCAACTGCCAGTGCTTTGGCTTACCTTCATGCCTCCAGCATCATCCATCGTGATATCAAAACCAATAACATTCTCCTTGACAAGAACTTCTGTGTTAAGGTTGCGGATTTTGGACTTTCTAGGTTGTTCCCAGATGATGTCTCGCATGTTTCTACGGCTCCACAGGGAACACCAGGCTATCTTGACCCAGAATATCACTACTGCTTTAGGCTGACAGATAAAAGTGACGTGTATAGTTTTGGGGTTGTGCTTATGGAGCTGATATCTTCAATGCCAGCAGTTGATATAAGAAGAGACAAAGATGAGATTACGTTGGCGGGTCTTGCAGTTAGGAAGATTCGGAGGAATGAATTCGAGGAGTTGGTGGATCCATGTATGGGGATTGAGAAGGATAGTGAGGTGAAGAAGAAGGTGTTTGCAGTGGGAGAACTGGCATTCCATTGTTTGCAGATAGATAAGGAGATGAGGCCTTCCATTGATGAGGTTTTAGAGGTTTTGAGGAAAATCGAAGGTGGGAAAGTAGAAGGAGAGAAGGATATAGGGAAAGACAAAGATGGTGGTGAAGTTTCAAAGAATAAAGCAGATATACAAGCACAAGCAATGACTTCAATAAGCTTTGATCAAGTAAGGTTGTTCAAGTCAGCATCTTCTTCAAACAACATGATCCAGAAATGGAGAAATGGAAAAGTTGATCAGGCAAAATTGTTTAGCGTTTAA 1611 0.4339 MLKFSLETQIYRSVWLPKQFLDYTGCGKSTNETIFFRTQDEDDTPSSLAACPRVQVPVNMLAFSADPFTFIASEFHVNIQLSPGCGRCCFEKGLCRLNSTGGFYCLKLKEDQNKRRPWKLGTIIGFGVGLGILILALLLCFGLYKHKQNPISHVRLRSTNQYPNDADPDSGRLFFGVPIFSYTELQGATNNFDPSNKLGDGGFGSVYYGKLQDGREVAVKHLFNHNYKRVEQFMTEVEILTRLRHQNLVCLYGCTSRQSRELLLVYEYIPNGTLASHLRGNYANPALLTWPIRIKIAIATASALAYLHASSIIHRDIKTNNILLDKNFCVKVADFGLSRLFPDDVSHVSTAPQGTPGYLDPEYHYCFRLTDKSDVYSFGVVLMELISSMPAVDIRRDKDEITLAGLAVRKIRRNEFEELVDPCMGIEKDSEVKKKVFAVGELAFHCLQIDKEMRPSIDEVLEVLRKIEGGKVEGEKDIGKDKDGGEVSKNKADIQAQAMTSISFDQVRLFKSASSSNNMIQKWRNGKVDQAKLFSV 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4443g00022 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672|GO:0006468
Pral4443g00022 536 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 30 499 IPR044652 GO:0004672
Pral4443g00022 536 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 175 268 - -
Pral4443g00022 536 ProSitePatterns Protein kinases ATP-binding region signature. 198 220 IPR017441 GO:0005524
Pral4443g00022 536 Gene3D Transferase(Phosphotransferase) domain 1 269 475 - -
Pral4443g00022 536 Pfam Protein tyrosine and serine/threonine kinase 196 463 IPR001245 GO:0004672|GO:0006468
Pral4443g00022 536 CDD STKc_IRAK 198 467 - -
Pral4443g00022 536 SUPERFAMILY Protein kinase-like (PK-like) 172 464 IPR011009 -
Pral4443g00022 536 ProSiteProfiles Protein kinase domain profile. 192 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00022 536 FunFam Wall-associated receptor kinase-like 20 269 477 - -
Pral4443g00022 536 SMART serkin_6 192 464 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00022 536 Gene3D Phosphorylase Kinase; domain 1 167 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4443g00022 Pral-Chr4443 247677 288994 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4443g00022 18 468 Receptor kinase-like Gene Family AT1G25390 49.011 1.19e-146 434
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4443g00022 PK_Tyr_Ser-Thr 5.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4443g00022 - - rcu:8271488 506.908