Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4443g00020 ATGATCCAAAACCGCCACCTCTTCCCATCTTCTTCCTCCTCCTTCTTCATCATCGTCTTCCTCTGTTCGCTGGCCAGATTCACCTCGTGTTCATCTCTGAACCCAAAGTTCGAAGCTTGTCAGCCCGCAACCTGCGGCAACCAAACCATAACCTACCCTTTTTACATCGAAGGCCGACAACAACCCTTCTGTGGCTACCCAGGTTTCGGCCTTTCTTGTTCCGATAATGCGTTCCCAATCCTCAATATCTCCCATACCCGCTACATCATCCATGAAATTTCTTACATCACGCACTCAATTCGAGTGTCCGAAGCTGCTTTGTCTACATCAAACTCCACATCATCAGCATCATCCTGTGCGATTCCTCGTACTCACAACATCACTATCGAGGGGACAAGATTCAGTTACGCTCCGAACCAGAGGAACCTGTTCTTGTTGTTCGGATGCAATCTGGGGTTGCTGCCGGACAATCTTCTGAATTACAGAATTGGGTGTTCTGCAGACAACGAAACGAATCCAGTTTTGGCCATGACGGAGGGGAAGGGTGGAGATTTGAGGTCTGCGACGGAGAAGTGTAATAATACGGTGGTGAGGACGAAGATTAGTGAGAATCAAACGAGAGGAGAGATTAACATGGATGTGGTGAGAAGAGGTTTTGTGTTGAATTGGTTAGTGGCGAATTGCAGTTTGTGTTCGAAGACGAGAGGCAAGTGTGGGTTCGACTTCAGCAAAAATGTTTACAGTTTCAGATGCTATTGCCCAGATAGAGATCATGCCGTCAGATGCGATACCGAGGATAGGAGCAGGGTTCTGAAGCTGGGACTAGGAATAGGATTAGGCATTGGGCTTCCGGTCATTCTGATGACTGTGTGGCTCATTGGACGATGGTGTTACAGGCGAAAACATGGTTCTGATGATGATTATCAATTCGAACCCAGAAACTCTTTTTCTGCTGATTATTCAAACTCAGACCCAGAAAATGGCAATATCTACTTGGGAGTTCCACTTTTCTCTTGCAAACAGCTTCAAGAAGCAACAAACAACTTCGACCAAGCAAGAGTACTAGGAGATGGCGGCTTTGGAATTGTTTACTATGGAAAACTCAGTGATGGACGAGAAGTTGCTGTGAAACGTTTATATGAACACAATTACAGACGAGTAGAACAGTTCAGAAATGAAGTGAAGATCCTAGCACGCTTACGCCACAAAAATCTTGTGTCTTTATATGGCTGCACTTCACGGCGTAGCCAAGACCTCGTCCTTGTCTACGAATACATCTCAAATGGCACTGTCGCTAGTCATCTTGAAGGTGACTTATCGAACTGTACATCACTCTCATGGCCTATTCGAATCAAAATCGCCATAGAAACTGCAAGTGCTTTGGTCTACCTTCATGCTTCAGACATCATCCATCGTGATGTCAAAACCAGCAACATCCTCTTAGACAGCAATTTTAACGTTAAAGTTGCTGACTTTGGACTGTCTAGATTGTTCCCCAATGATGTGTCGCATGTTTCCACAGCCCCACAAGGAACTCCAGGATATGTTGACCCAGAATACTACCAATGTTACCAGCTTACTAGTAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTTATTGAGTTGATTTCTTCTAAACCTGCGGTGGATATAAGCAGAAGTAAGGATGAAGTGAACTTGTCGAGTTTGGCGATGAAGAAGATTCAGGAGAGTGCGTTTGTGGAGCTGGTGGATCCAAGTTTGGGGTTTGAGGATGATAGTGAAGTGAAGAGGATGGTGGTTTCTGTGGGGGAATTGGCGTTTCAGTGTTTGCAGAGAGATAAAGATTTGAGGCCTTCCATGGAAGAGGTTTTGGAAGCGCTCAAGAGGATTCAGAGTGGGAAAGGTGAGGTTGAGAATCTTGAAGATGGCGGTAATGTGAATCCATTGGCACCGCCGCCGCCATCGCCGCCGTCAGTGTCACCGGAGAAGGAAGAAGTTGGCTTATTAAAGAAGGTGAACCCACCTCCTTCTTCGCCCAATACTGTGACTGAAAAGTGGACGAGTGAATCTACCACCCCTAATGCGAGTGCTTGA 2076 0.46 MIQNRHLFPSSSSSFFIIVFLCSLARFTSCSSLNPKFEACQPATCGNQTITYPFYIEGRQQPFCGYPGFGLSCSDNAFPILNISHTRYIIHEISYITHSIRVSEAALSTSNSTSSASSCAIPRTHNITIEGTRFSYAPNQRNLFLLFGCNLGLLPDNLLNYRIGCSADNETNPVLAMTEGKGGDLRSATEKCNNTVVRTKISENQTRGEINMDVVRRGFVLNWLVANCSLCSKTRGKCGFDFSKNVYSFRCYCPDRDHAVRCDTEDRSRVLKLGLGIGLGIGLPVILMTVWLIGRWCYRRKHGSDDDYQFEPRNSFSADYSNSDPENGNIYLGVPLFSCKQLQEATNNFDQARVLGDGGFGIVYYGKLSDGREVAVKRLYEHNYRRVEQFRNEVKILARLRHKNLVSLYGCTSRRSQDLVLVYEYISNGTVASHLEGDLSNCTSLSWPIRIKIAIETASALVYLHASDIIHRDVKTSNILLDSNFNVKVADFGLSRLFPNDVSHVSTAPQGTPGYVDPEYYQCYQLTSKSDVYSFGVVLIELISSKPAVDISRSKDEVNLSSLAMKKIQESAFVELVDPSLGFEDDSEVKRMVVSVGELAFQCLQRDKDLRPSMEEVLEALKRIQSGKGEVENLEDGGNVNPLAPPPPSPPSVSPEKEEVGLLKKVNPPPSSPNTVTEKWTSESTTPNASA 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4443g00020 691 FunFam Wall-associated receptor kinase-like 20 426 633 - -
Pral4443g00020 691 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Pral4443g00020 691 Pfam Wall-associated receptor kinase C-terminal 183 255 IPR032872 -
Pral4443g00020 691 FunFam receptor-like protein kinase FERONIA 315 425 - -
Pral4443g00020 691 MobiDBLite consensus disorder prediction 628 691 - -
Pral4443g00020 691 MobiDBLite consensus disorder prediction 668 691 - -
Pral4443g00020 691 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Pral4443g00020 691 SUPERFAMILY Protein kinase-like (PK-like) 330 622 IPR011009 -
Pral4443g00020 691 CDD STKc_IRAK 355 624 - -
Pral4443g00020 691 SMART serkin_6 349 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00020 691 Gene3D Phosphorylase Kinase; domain 1 322 425 - -
Pral4443g00020 691 Gene3D Transferase(Phosphotransferase) domain 1 426 634 - -
Pral4443g00020 691 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 685 IPR044652 GO:0004672
Pral4443g00020 691 ProSiteProfiles Protein kinase domain profile. 349 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00020 691 Pfam Protein kinase domain 350 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00020 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 469 481 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4443g00020 Pral-Chr4443 239262 246154 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4443g00020 211 691 Receptor kinase-like Gene Family AT1G25390 55.670 1.60e-167 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4443g00020 Pkinase 1.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4443g00020 - - psat:127098518 736.873