Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4443g00019 ATGATCCAAAACCGCCACCTCTTCCCATCTTCTTCCTCCTCCTTCTTCATCATCGTCTTCCTCTGTTCGCTGGCCAGATTCACCTCGTGTTCATCTCTGAACCCAAAGTTCGAAGCTTGTCAGCCCGCAACCTGCGGCAACCAAACCATAACCTACCCTTTTTACATCGAAGGCCGACAACAACCCTTCTGTGGCTACCCAGGTTTCGGCCTTTCTTGTTCCGATAATGCGTTCCCAATCCTCAATATCTCCCATACCCGCTACATCATCCATGAAATTTCTTACATCACGCACTCAATTCGAGTGTCCGAAGCTGCTTTGTCTACATCAAACTCCACATCATCAGCATCATCCTGTGCGATTCCTCGTACTCACAACATCACTATCGAGGGGACAAGATTCAGTTACGCTCCGAACCAGAGGAACCTGTTCTTGTTGTTCGGATGCAATCTGGGGTTGCTGCCGGACAATCTTCTGAATTACAGAATTGGGTGTTCTGCAGACAACGAAACGAATCCAGTTTTGGCCATGACGGAGGGGAAGGGTGGAGATTTGAGGTCTGCGACGGAGAAGTGTAATAATACGGTGGTGAGGACGAAGATTAGTGAGAATCAAACGAGAGGAGAGATTAACATGGATGTGGTGAGAAGAGGTTTTGTGTTGAATTGGTTAGTGGCGAATTGCAGTTTGTGTTCGAAGACGAGAGGCAAGTGTGGGTTCGACTTCAGCAAAAATGTTTACAGTTTCAGATGCTATTGCCCAGATAGAGATCATGCCGTCAGATGCGATACCGTTCCTGCTGCAGAGGATAGGAGCAGGGTTCTGAAGCTGGGACTAGGAATAGGATTAGGCATTGGGCTTCCGGTCATTCTGATGACTGTGTGGCTCATTGGACGATGGTGTTACAGGCGAAAACATGGTTCTGATGATGATTATCAATTCGAACCCAGAAACTCTTTTTCTGCTGATTATTCAAACTCAGACCCAGAAAATGGCAATATCTACTTGGGAGTTCCACTTTTCTCTTGCAAACAGCTTCAAGAAGCAACAAACAACTTCGACCAAGCAAGAGTACTAGGAGATGGCGGCTTTGGAATTGTTTACTATGGAAAACTCAGTGATGGACGAGAAGTTGCTGTGAAACGTTTATATGAACACAATTACAGACGAGTAGAACAGTTCAGAAATGAAGTGAAGATCCTAGCACGCTTACGCCACAAAAATCTTGTGTCTTTATATGGCTGCACTTCACGGCGTAGCCAAGACCTCGTCCTTGTCTACGAATACATCTCAAATGGCACTGTCGCTAGTCATCTTGAAGGTGACTTATCGAACTGTACATCACTCTCATGGCCTATTCGAATCAAAATCGCCATAGAAACTGCAAGTGCTTTGGTCTACCTTCATGCTTCAGACATCATCCATCGTGATGTCAAAACCAGCAACATCCTCTTAGACAGCAATTTTAACGTTAAAGTTGCTGACTTTGGACTGTCTAGATTGTTCCCCAATGATGTGTCGCATGTTTCCACAGCCCCACAAGGAACTCCAGGATATGTTGACCCAGAATACTACCAATGTTACCAGCTTACTAGTAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTTATTGAGTTGATTTCTTCTAAACCTGCGGTGGATATAAGCAGAAGTAAGGATGAAGTGAACTTGTCGAGTTTGGCGATGAAGAAGATTCAGGAGAGTGCGTTTGTGGAGCTGGTGGATCCAAGTTTGGGGTTTGAGGATGATAGTGAAGTGAAGAGGATGGTGGTTTCTGTGGGGGAATTGGCGTTTCAGTGTTTGCAGAGAGATAAAGATTTGAGGCCTTCCATGGAAGAGGTTTTGGAAGCGCTCAAGAGGATTCAGAGTGGGAAAGGTGAGGTTGAGAATCTTGAAGATGGCGGTAATGTGAATCCATTGGCACCGCCGCCGCCATCGCCGCCGTCAGTGTCACCGGAGAAGGAAGAAGTTGGCTTATTAAAGAAGGTGAACCCACCTCCTTCTTCGCCCAATACTGTGACTGAAAAGTGGACGAGTGAATCTACCACCCCTAATGCGAGTGCTTGA 2088 0.4607 MIQNRHLFPSSSSSFFIIVFLCSLARFTSCSSLNPKFEACQPATCGNQTITYPFYIEGRQQPFCGYPGFGLSCSDNAFPILNISHTRYIIHEISYITHSIRVSEAALSTSNSTSSASSCAIPRTHNITIEGTRFSYAPNQRNLFLLFGCNLGLLPDNLLNYRIGCSADNETNPVLAMTEGKGGDLRSATEKCNNTVVRTKISENQTRGEINMDVVRRGFVLNWLVANCSLCSKTRGKCGFDFSKNVYSFRCYCPDRDHAVRCDTVPAAEDRSRVLKLGLGIGLGIGLPVILMTVWLIGRWCYRRKHGSDDDYQFEPRNSFSADYSNSDPENGNIYLGVPLFSCKQLQEATNNFDQARVLGDGGFGIVYYGKLSDGREVAVKRLYEHNYRRVEQFRNEVKILARLRHKNLVSLYGCTSRRSQDLVLVYEYISNGTVASHLEGDLSNCTSLSWPIRIKIAIETASALVYLHASDIIHRDVKTSNILLDSNFNVKVADFGLSRLFPNDVSHVSTAPQGTPGYVDPEYYQCYQLTSKSDVYSFGVVLIELISSKPAVDISRSKDEVNLSSLAMKKIQESAFVELVDPSLGFEDDSEVKRMVVSVGELAFQCLQRDKDLRPSMEEVLEALKRIQSGKGEVENLEDGGNVNPLAPPPPSPPSVSPEKEEVGLLKKVNPPPSSPNTVTEKWTSESTTPNASA 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4443g00019 695 MobiDBLite consensus disorder prediction 672 695 - -
Pral4443g00019 695 CDD STKc_IRAK 359 628 - -
Pral4443g00019 695 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Pral4443g00019 695 SUPERFAMILY Protein kinase-like (PK-like) 334 626 IPR011009 -
Pral4443g00019 695 Gene3D Phosphorylase Kinase; domain 1 326 429 - -
Pral4443g00019 695 MobiDBLite consensus disorder prediction 632 695 - -
Pral4443g00019 695 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Pral4443g00019 695 SMART serkin_6 353 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00019 695 ProSiteProfiles Protein kinase domain profile. 353 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00019 695 FunFam Wall-associated receptor kinase-like 20 430 637 - -
Pral4443g00019 695 FunFam receptor-like protein kinase FERONIA 319 429 - -
Pral4443g00019 695 Pfam Wall-associated receptor kinase C-terminal 183 255 IPR032872 -
Pral4443g00019 695 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 689 IPR044652 GO:0004672
Pral4443g00019 695 Pfam Protein kinase domain 354 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00019 695 Gene3D Transferase(Phosphotransferase) domain 1 430 638 - -
Pral4443g00019 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4443g00019 Pral-Chr4443 239260 246154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4443g00019 211 695 Receptor kinase-like Gene Family AT1G25390 55.441 1.66e-167 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4443g00019 Pkinase 1.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4443g00019 - - aip:107643858 740.725