Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4443g00011 ATGCAAGTTATTCCATTTCACCAAATTCTGTCACGTGGCATATATGTAGGTGTACCAAGTGCAACTGTTGTGATTATAATTGGTTTGGTTGTTATTCTATTGCGGAACAAACGAAGACACAAGTCTTTGGGCTCACAAAATCAGTCAAGAACCATTGAATCTGATAATACTCACTCAAATGTAATCCTAGAAGGTAGACACATCTACTTTAAGTTCCCTGTCTTCTCCTATGAGGAACTCGAAGAAGCAACAAACAAATTTGATCAATCAAGAGAACTTGGAAGTGGAGGTTTTGGAACTGTTTACTATGGAAAACTTAAAGATGGACGAGAAGTTGCTGTTAAGCGGCTGTTTGAGCGCAACTCATGTGTACAGCAATTCATGAATGAAATTAAGATTCTAACAGGCTTGCGGCACAAAAACCTTGTGTCACTTTACGGCTGCACTTCCCGTACCAGTCGTGAACTGCTCCTAGTCTACGAATATATTCCAAATGGAACTCTTGGTTGTCATCTTCATGGAAATCTAGCAAAACCTGGTTCACTACCGTGGCCCTTGAGGATGAGGATTGCCATAGAGACGGCAAAGGCATTGTCCTATCTCCATGCTTCTGGCATCATTCACCGGGATGTCAAATCCAGCAACCTTCTTCTAGATCACCATTTTTGTGTCAAGGTTGCTGACTTTGGTATTTCCAGATTATTTCCCATGTTTGTGTCTCATGTCTCCACGGCTCCAGCAGGAAGCCCAGGTTATTTGGACCCCGAATATTACCAATTCTGCGAGCTTACTGAAAAGAGTGATGTTTATAGTTTCGGAGTCGTGCTGATTGAGCTCATATCTTCTAAGCCAGCTATCATTGTTACAAAGGCCAAGGATAAGATTAGTTTGGCAAATATGGCAGTTAAGAAGATTCAGAAAAGAGCGTTTACTGAGTTTGTAGATCCTTCCCTTTGTTTTGAGTTTGATGACAAGGTTAAGGAGATGATAATTTCAGTGGCAAACTTAGCTTTTCAGTGCCTACAGAGGGACGGAGAGCTAAGACCTTCAATGGATAAAGTAGTGGAGTTTCTGCAGAAAATTGAAAATGGGAAGGATGATTATCTAAAGCACCTAGAGTTTCGTGATGCTGGGTTTTTGAACTAG 1146 0.411 MQVIPFHQILSRGIYVGVPSATVVIIIGLVVILLRNKRRHKSLGSQNQSRTIESDNTHSNVILEGRHIYFKFPVFSYEELEEATNKFDQSRELGSGGFGTVYYGKLKDGREVAVKRLFERNSCVQQFMNEIKILTGLRHKNLVSLYGCTSRTSRELLLVYEYIPNGTLGCHLHGNLAKPGSLPWPLRMRIAIETAKALSYLHASGIIHRDVKSSNLLLDHHFCVKVADFGISRLFPMFVSHVSTAPAGSPGYLDPEYYQFCELTEKSDVYSFGVVLIELISSKPAIIVTKAKDKISLANMAVKKIQKRAFTEFVDPSLCFEFDDKVKEMIISVANLAFQCLQRDGELRPSMDKVVEFLQKIENGKDDYLKHLEFRDAGFLN 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4443g00011 381 FunFam receptor-like protein kinase FERONIA 46 162 - -
Pral4443g00011 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Pral4443g00011 381 Pfam Protein tyrosine and serine/threonine kinase 89 358 IPR001245 GO:0004672|GO:0006468
Pral4443g00011 381 FunFam Wall-associated receptor kinase-like 20 163 370 - -
Pral4443g00011 381 ProSiteProfiles Protein kinase domain profile. 87 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00011 381 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Pral4443g00011 381 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 365 IPR044652 GO:0004672
Pral4443g00011 381 Gene3D Phosphorylase Kinase; domain 1 59 162 - -
Pral4443g00011 381 CDD STKc_IRAK 93 361 - -
Pral4443g00011 381 SMART serkin_6 87 358 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00011 381 Gene3D Transferase(Phosphotransferase) domain 1 163 371 - -
Pral4443g00011 381 SUPERFAMILY Protein kinase-like (PK-like) 69 362 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4443g00011 Pral-Chr4443 168018 169299 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4443g00011 6 363 Receptor kinase-like Gene Family AT1G25390 55.556 5.14e-135 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4443g00011 PK_Tyr_Ser-Thr 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4443g00011 - - pcin:129310591 584.334