Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4443g00010 ATGCATATTTGGAGAAGCGTCTGTACTCCACTCAATCAGAGTCTTTCAAAGCAATTCTTGAACTATACAGGATGTGCTAAAAGTAAGAATGAGACCATCTTCTTCCGAACGCAAGATCAGGATGAACCTCAACCTCTTTTAGCAACATGTCCAAGGGTTCAGCTTCCAGTGAATAAGCTGGCTTTCTCTCCTGATCCATTCACATTCATAGCTTCTGAATTCCCTGTTACAGTTCAGCTTTCTAATGACTGTGCTTCATGTGTTTCTGACAAAGGGATATGCAAGCTCAACAGCACTGGAGGATTTTATTGTCTCAACGGCATATATATAGGTGTAACAAGTGGAACTGTTGTGATTATAATTGGTTTGGTTGTTTTTCAATTGCGGAACAAACGAAGACACAAGTCTTTGGGCTCACAAAATCAGTCAAGAACCATTGAATCTGATAATACTCACTCAAATGTAATCCTAGAAGATAGACACATCTACTTTAAGTTCCCCGTCTTCTCCTATGAGGAACTCGAAGAAGCAACAAACAAATTTGATCGATCAAGAGAACTTGGAAGCGGAGGCTTTGGAACTGTTTACTATGGAAAACTTAAAGATGGACGAGAAGTTGCTGTTAAGCGGCTGTTTGAGCGCAACTCATGTGTACAGCAATTCATGAATGAAGTTAAGATTCTAACAGGCTTGCGGCACAAAAACCTTGTGTCACTTTATGGCTGCACTTCCCGTACCAGTCGTGAACTGCTCCTAGTCTACGAATATATTCCAAATGGAACTCTTGGTTGTCATCTTCATGGAAATCTAGCAAAACCTGGTTCACTACCGTGGCCCTTGAGGATGCGGATTGCCATAGAGACAGCAAACGCATTGTCCTATCTCCATGCTTCTGGCATCATTCACCGCGATGTCAAATCCAGCAACCTTCTTCTAGATCACCATTTTTGTGTCAAGGTTGCTGACTTTGGTATTTCCAAATTGTTTCCCATGTTTGTGTCTCATGTCTCCACGGCTCCAGCAGGTAGCCCAGGTTATTTGGACCCCGAATATTACCAATTCTGCGAGCTTACTGAAAAGAGTGATGTTTATAGTTTCGGAGTCGTGCTGATTGAACTCATATCTTCTAAGCCAGCTATCATTGTTACAAGGGCCAAGGATAAGATTAATTTGGCAAATATGGCAGTTAAGAAGATTCAGAAAAGAGCGTTTACTGAGTTTGTAGATCCTTCCCTTTGTTTTGAGTCTGATGACAAGGTTAAGGAGATGATAATCTCAGTGGCAAACTTAGCTTTTCAGTGCCTACAGAGGGATGGAGAGCTAAGACCTTCCATGGATAAAGTAGTGGAGTTTCTGCAGAAAATTGAAAATGGGAAGGATGATTATCTAAAGCACCTAGAGTTTCGTGGTGTTGGGTTTTCGAACTGGGAGATACATACATCTCTTCCAACCTCACTACTTTTGGATGGAGCTGGATCACTAAATGACTCAATGCCACAACTCCCTCCCCGTACAGTATGA 1521 0.4181 MHIWRSVCTPLNQSLSKQFLNYTGCAKSKNETIFFRTQDQDEPQPLLATCPRVQLPVNKLAFSPDPFTFIASEFPVTVQLSNDCASCVSDKGICKLNSTGGFYCLNGIYIGVTSGTVVIIIGLVVFQLRNKRRHKSLGSQNQSRTIESDNTHSNVILEDRHIYFKFPVFSYEELEEATNKFDRSRELGSGGFGTVYYGKLKDGREVAVKRLFERNSCVQQFMNEVKILTGLRHKNLVSLYGCTSRTSRELLLVYEYIPNGTLGCHLHGNLAKPGSLPWPLRMRIAIETANALSYLHASGIIHRDVKSSNLLLDHHFCVKVADFGISKLFPMFVSHVSTAPAGSPGYLDPEYYQFCELTEKSDVYSFGVVLIELISSKPAIIVTRAKDKINLANMAVKKIQKRAFTEFVDPSLCFESDDKVKEMIISVANLAFQCLQRDGELRPSMDKVVEFLQKIENGKDDYLKHLEFRGVGFSNWEIHTSLPTSLLLDGAGSLNDSMPQLPPRTV 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4443g00010 506 FunFam Wall-associated receptor kinase-like 20 257 464 - -
Pral4443g00010 506 Gene3D Transferase(Phosphotransferase) domain 1 257 465 - -
Pral4443g00010 506 SUPERFAMILY Protein kinase-like (PK-like) 163 457 IPR011009 -
Pral4443g00010 506 ProSitePatterns Protein kinases ATP-binding region signature. 187 209 IPR017441 GO:0005524
Pral4443g00010 506 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 24 459 IPR044652 GO:0004672
Pral4443g00010 506 Pfam Protein tyrosine and serine/threonine kinase 184 452 IPR001245 GO:0004672|GO:0006468
Pral4443g00010 506 SMART serkin_6 181 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00010 506 Gene3D Phosphorylase Kinase; domain 1 152 256 - -
Pral4443g00010 506 CDD STKc_IRAK 187 455 - -
Pral4443g00010 506 ProSiteProfiles Protein kinase domain profile. 181 463 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00010 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 300 312 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4443g00010 Pral-Chr4443 151525 154996 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4443g00010 12 457 Receptor kinase-like Gene Family AT1G25390 45.870 2.21e-136 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4443g00010 PK_Tyr_Ser-Thr 7.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4443g00010 - - pcin:129310591 630.943