Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4443g00009 ATGGTTCTACCTGTTTATTTGTTCTTCTTTTTCTTGTTCTTGTTCTCTGACCATTCTGCTTCAGGAGATGGGTGCCCACGTTTCTGTGACTGTGGGAACCTGGGGAAGCTCTCGTTCCCTTTAACCACTCCAGAACGCAAAGACTGTGGGATTTTGCCGATTCATGGCTGTGAAAACCCCAACGCCCAAAAAACTGTGCAATTCGGGAAAAAGATGTTTCAAGTGACGAGGATAGAATCTGGGTTGACTCTTGCAGGAGTTGTCGTTAGAGACGCATATTTGGAGAAGCGTTTGGCAAGTAATAGTTGTGACGTCTTGCGTTACAATATTACTCTTCCTCCCAACTCAGCTTTGGGTTCCTTTCATATCTTGTCAACTATAACCATGTACAAATGCGATACTCCACTAAATCAGAGTCTTTCAAAGCAATTCTTGAACTATACAGGATGTGCTAAAGGTAAGAATGAGACCATCTTCTTCCGAACGCAAGATCAGGATGACCCTCCACCTCCTTTAGCAACATGTCCAAGGGTTCAGCTTCCAGTGAATGCGATGGCTTTCTCTCCTGATCCATTTACATTCATAGCTTCTGAATTCCGTGTTAATATTCAGCTTTCTCCTGGTTGTGCTCAATGTTTTTCTGACAAAGGCTCATGCCGTCTCAACAGCACCAGAGAATTTTATTGTCTCAAAGATGAAATTGAGACAGAAAGACGGGCTTGGAAGCTGGGATTGCTAATAGGTGTACCAAGTGCAACTGTTGTGATTATAATTGGTTTGGTTGTTATTATATTGCGGAACAAACGAAGAGACAAGTCTTTGGGCTCACAAAATCAGTCAAGAACCATTGAATCTGATAATACTCACTCAAATGTAATCCTAGAAGGTAGACACATCTACTTTAAGTTCCCTGTCTTCTCCTATGAGGAACTCGAAGAAGCAACAAACAAATTTGATCAATCAAGAGAACTTGGAAGTGGAGGTTTTGGAACTGTTTACTATGGAAAACTTAAAGATGGACGAGAAGTTGCTGTTAAGCGGCTGTTTGAGCGCAACTCATGTGTACAGCAATTCATGAATGAAATTAAGATTCTAACACGCTTGCGGCACAAAAACCTTGTGTCACTTTATGGCTGCACTTCCCGTACCAGTCGTGAACTGCTCCTAGTCTACGAATATATTCCAAATGGAACTCTTGGTTGTCATCTCCATGGAAATCTAGCAAAACCTGGTTCACTACCGTGGCCCTTGAGGATGAGGATTGCCATAGAGACGGCAAAGGCATTGTCCTATCTCCATGCTTCTGGCATCATTCACCGGATGTCAAATCCACAACCTTCTTCTAGATCACCATTTTTGTGTCAAGGTTGCTGA 1374 0.425 MVLPVYLFFFFLFLFSDHSASGDGCPRFCDCGNLGKLSFPLTTPERKDCGILPIHGCENPNAQKTVQFGKKMFQVTRIESGLTLAGVVVRDAYLEKRLASNSCDVLRYNITLPPNSALGSFHILSTITMYKCDTPLNQSLSKQFLNYTGCAKGKNETIFFRTQDQDDPPPPLATCPRVQLPVNAMAFSPDPFTFIASEFRVNIQLSPGCAQCFSDKGSCRLNSTREFYCLKDEIETERRAWKLGLLIGVPSATVVIIIGLVVIILRNKRRDKSLGSQNQSRTIESDNTHSNVILEGRHIYFKFPVFSYEELEEATNKFDQSRELGSGGFGTVYYGKLKDGREVAVKRLFERNSCVQQFMNEIKILTRLRHKNLVSLYGCTSRTSRELLLVYEYIPNGTLGCHLHGNLAKPGSLPWPLRMRIAIETAKALSYLHASGIIHRMSNPQPSSRSPFLCQGC 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4443g00009 457 ProSiteProfiles Protein kinase domain profile. 318 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00009 457 Pfam Protein tyrosine and serine/threonine kinase 320 440 IPR001245 GO:0004672|GO:0006468
Pral4443g00009 457 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Pral4443g00009 457 FunFam receptor-like protein kinase FERONIA 277 393 - -
Pral4443g00009 457 Gene3D Transferase(Phosphotransferase) domain 1 394 445 - -
Pral4443g00009 457 Gene3D Phosphorylase Kinase; domain 1 291 393 - -
Pral4443g00009 457 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 440 IPR044652 GO:0004672
Pral4443g00009 457 SUPERFAMILY Protein kinase-like (PK-like) 300 440 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4443g00009 Pral-Chr4443 113172 116040 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4443g00009 24 440 Receptor kinase-like Gene Family AT1G25390 39.059 6.12e-77 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4443g00009 PK_Tyr_Ser-Thr 1.4e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4443g00009 - - pcin:129310591 387.111