Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4443g00008 ATGCTTCCTTTGGTCTCATTGTTTCTTCTCCTTCTCTGTAATCGTTTTTCGACTGTGACTTCTCTAAATGCCGAAGGCTCTGTGCTTTTGGCTCTTAAGCAGTCCATCACTGACCCAGAAGGGTCTATGAGTAACTGGAATTCTTCTGATGAAAACCCCTGTTCGTGGAATGGGGTTACATGCAAGGAACAGAGTGTCATTTCTCTCAGCATTCCAAAGGGGAAGCTTTACGGCTCGCTTCCTTCTTCTCTGGGGTCTCTTTCTCAGCTTCGCCATGTGAATTTCAGGAACAATAAGCTCTTTGGGAAGTTGCCTCCTGAGCTATTCGCAGCACAGGGACTGCAAAGTTTAGTCCTTTACGGCAATTCCTTTTCTGGGCCTGTTCCACAAGAGATTGGGAAGCTCAGGTACCTTCAAACCTTAGATTTATCACAAAATTTCTTCAATGGGTCTTTACCTGCTACAATTGTCCAATGCAAGAGACTCAGGTCCCTTGTTCTGAATCACAACAATTTCACCGGTTCTCTTCCGGATCGATTTGGTACTGATTTGTTCTCTCTGGAAAAGCTTGACCTTGCTTTCAATCACTTCAACGGCTCAATTCCTAGTGATATGGGGAATCTATCTCGTCTACAAGGAACTGTAGATTTATCTCATAATAGTTTTTCTGGCTCAATCCCACCCAGCCTTGGTAATTTGCCTGAGAAGGTCTATATTGATCTTACTTTCAACAATTTGAGTGGTCCGATACCACAAAATGGTGCTTTGATGAACAGAGGACCAACAGCTTTTATAGGCAACTCTGGTCTCTGCGGACCTCCGTTGAAGAACCCTTGTTCTTCAGAAACTCCTGGTGCTAGCTCGCCTTCCTCGTTCCCATTTCTGCCAGATAACTACCCACCTGGGTCTTCTGGTAATCCTTATGTGAGGAATGAGAAAACCAAAGGGTGGAGTAAGGGTGCTATTGTAGGCATTGTTGTGGGTGATATAGTTGGAATTTGCCTCTTGGGTCTGTTGTTCTCTTACTGCTACTCAAGGGTCTGTGGGTTTAATCTGGATAATGAAGATGAAGCTGGTTTTGAGAAGGGAGAGAAAGGAAGGAGGAAAGAGTGTTTTTGCTTCAGAAAGGATGAATCTGAGACCTTATCAGAGAATGTTGAGCAATATGATCTTGTCCCGTTAGATGGTCAAGTGGCATTTGATTTGGATGAGCTTCTCAAGGCTTCAGCTTTTGTTTTGGGGAAGAGTGGAATAGGCATTGTCTACAAGGTAGTGCTCGAAGATGGGCTTACCTTAGCTGTGAGAAGATTAGGTGAAGGTGGTTCTCAAAGGTTTAAAGAATTCCAGACAGAAGTGGAAGCAATAGGAAGATTGAGGCATCCTAACATTGTTACTCTTAGAGCTTATTATTGGTCTGTTGATGAGAAACTTCTCATCTATGATTATATACCCAATGGAAATCTTGCTACAGCAATTCACGGGAAGGCTGGAATAGTTGCATTCACGCCACTTTCTTGGTCATTTCGGCTGAAAATCATGAAAGGAATTGCAAAAGGATTGGTCTACCTGCATGAGTTTAGCCCCAAAAAATATGTCCACGGAGACCTGAAACCAAGTAACATACTGCTTGGGCATAACATGGAACCCCACATTTCTGATTTTGGACTTGGAAGACTTGCAAATATTGCTGGAGGGTCTCCAACTCTGCAATCCAATCGTGTCGCTGCTGAGAAACCCCATGAAAGGCAGAAGAGCTTCTCTGCATCAGAAGTCTCAGCTAATGTTTTGGGAACTGGCTATCAGGCTCCAGAAGCATTGAAGGTGGTGAAGCCATCACAGAAATGGGATGTTTACTCATATGGTGTGATTTTGATAGAGATGATCACAGGAAGGTTGCCCATTGTCCATGTGGGAAACTCAGAAATGGATCTTGTCCAATGGATTCAGTTCTGCATTGAGGATAAGAAGCCACTCTCAGATGTAATAGACCCATATCTCCCTGAAGATGCAGATAAGGAAGAGGAGATTATTGCAGTTTTGAAGATTGCAATGGCTTGTGTCCATAGCAGCCCCGAGAAGAGACCGACAATGAGGCATGTTCTTGATGCTTTGGATAGGTTGTCCGCTTCTTCTGATTGA 2139 0.4376 MLPLVSLFLLLLCNRFSTVTSLNAEGSVLLALKQSITDPEGSMSNWNSSDENPCSWNGVTCKEQSVISLSIPKGKLYGSLPSSLGSLSQLRHVNFRNNKLFGKLPPELFAAQGLQSLVLYGNSFSGPVPQEIGKLRYLQTLDLSQNFFNGSLPATIVQCKRLRSLVLNHNNFTGSLPDRFGTDLFSLEKLDLAFNHFNGSIPSDMGNLSRLQGTVDLSHNSFSGSIPPSLGNLPEKVYIDLTFNNLSGPIPQNGALMNRGPTAFIGNSGLCGPPLKNPCSSETPGASSPSSFPFLPDNYPPGSSGNPYVRNEKTKGWSKGAIVGIVVGDIVGICLLGLLFSYCYSRVCGFNLDNEDEAGFEKGEKGRRKECFCFRKDESETLSENVEQYDLVPLDGQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRFKEFQTEVEAIGRLRHPNIVTLRAYYWSVDEKLLIYDYIPNGNLATAIHGKAGIVAFTPLSWSFRLKIMKGIAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHISDFGLGRLANIAGGSPTLQSNRVAAEKPHERQKSFSASEVSANVLGTGYQAPEALKVVKPSQKWDVYSYGVILIEMITGRLPIVHVGNSEMDLVQWIQFCIEDKKPLSDVIDPYLPEDADKEEEIIAVLKIAMACVHSSPEKRPTMRHVLDALDRLSASSD 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4443g00008 712 SUPERFAMILY L domain-like 24 276 - -
Pral4443g00008 712 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Pral4443g00008 712 Gene3D Ribonuclease Inhibitor 76 282 IPR032675 -
Pral4443g00008 712 SMART serkin_6 412 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00008 712 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 159 709 IPR046959 -
Pral4443g00008 712 FunFam Leucine-rich repeat receptor-like protein kinase 390 482 - -
Pral4443g00008 712 Gene3D Ribonuclease Inhibitor 18 75 IPR032675 -
Pral4443g00008 712 Gene3D Transferase(Phosphotransferase) domain 1 483 712 - -
Pral4443g00008 712 ProSiteProfiles Protein kinase domain profile. 407 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00008 712 Pfam Protein kinase domain 413 702 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00008 712 SUPERFAMILY Protein kinase-like (PK-like) 412 704 IPR011009 -
Pral4443g00008 712 CDD STKc_IRAK 413 707 - -
Pral4443g00008 712 FunFam Leucine-rich repeat protein kinase family protein 483 710 - -
Pral4443g00008 712 SMART LRR_typ_2 135 159 IPR003591 -
Pral4443g00008 712 SMART LRR_typ_2 87 111 IPR003591 -
Pral4443g00008 712 SMART LRR_typ_2 184 208 IPR003591 -
Pral4443g00008 712 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 22 182 - -
Pral4443g00008 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 531 543 IPR008271 GO:0004672|GO:0006468
Pral4443g00008 712 FunFam Leucine-rich repeat receptor-like protein kinase 186 281 - -
Pral4443g00008 712 Gene3D Phosphorylase Kinase; domain 1 376 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4443g00008 Pral-Chr4443 96964 99556 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4443g00008 1 712 Receptor kinase-like Gene Family AT2G01210 68.377 0.0 999
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral4443g00008 Pkinase 7.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4443g00008 - - gmx:100792873 1129.78