LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4443g00005	ATGGAGGTTCCCTCCGCCGTTCAGCCCCTTTCATCCGCCCCACCGCCACAAACCCCTCATCTCAACTATCCCGAGTCCGTCGACTCCTCTCCTCGATCCCGGAACACTGATTCATGGGATGAGCCTGTCCCTCCGGCCGCCGCAGCCGCGGCCTCCTCCAAACTTCGGTTCATGTGCAGCTATGGTGGCCACATCGTCCCTCGTCCCCATGATAAGTCCCTCTGTTACGTTGGTGGGGAAACGCGTATCGTTGTTGTTGAACGTAACACCTCCCTTTCTGACCTTTCCTCTCGTCTCTCTAAAACCTTCCTCAACGGCCGTCCCTTTACTCTCAAGTACTTGCTTCCCACTGAAGACCTTGATTCTCTTATTTCTGTGACCACCGATGAAGACCTCGATAACATGATCGACGAGTACGATCGAATTTCTAATTCGTCACTGAAACCCTCTAGAATCCGCCTCTTCTTGTTCACGGCGAAGCCCGATTCGACCCAATCGATACCCATAATTAACAGCTCCGCTAAGTCAGAGGATTGGTTTCTGGGTATGCTTAATAGAGGGTCGGATTCTGGTTCTGTTAATTTGTTGATGGGTTTTGATGATGAGCTTGGTGCGGGCAATCTGGATGGGGGTTCGAAAGATGTCGAGCCTGTGAGTTCTGGATCTTTTGGAAATGGCAAGAGTGCGAAGCAGCATGGTCAGGATGTTCACTCTGTGCCCGATTCACCTATGCTGGAAACCACATCTTCCTTTGGGTCCACTTCTTCATCGCCGTCGGTGGCGAATTTGCCGCCAATTCGGGTTCATATTGATGATGGTAGTGGTGGGGGAGCAAGGGTACAGGATCAGAAGGCGGTGGGGATTGAGGATCAGCTCGCTCAAATGGGTGTGGGTGGCGGACAGAAGCAAGATGAGGGTTTTCTGATGTCTTCACCTCCTACTATGCCGGCATCCACCGTCCCGGCCGGCGTGCCTGTTGGCTCCTCGGTCCCTCCCGGCGAATACCAGAATCGTGTTGTCTCTGATGATGAGAGATCAGACTATGGAGTCCTTGGGGGTTACAGGAAACCTCCCCCACCGCAGCCACAGACGGTGCCTCAGCCTCAGATTCTGCATACACAATTGCAGCAGAAGCCGACTGGAGGCGTTGATCTGCCTTCTCCAGATTCAGTTTCAAGTGACAGTAGTATGAAAAATGCAATGTCGCGCCCACAACCTATGGTCTATCAAGACCAAGCCCAGCTCCAAATTCCCTCAGGAGCTGCGAGGGTTCCTAGTAATCAGGTTGATCCGAAACTGATGTCTGATTCTCATGGTCGGATCCAAATGCAGCAACAAGTATTGGAGCAGGGATATGTTTTGCAACAACAATTTGATCATCATCAACAACAACAACAACAACCACCTCAACAGCAGCACCAATTTATACATGGAACACAGCAACAAGTACAGGAAGCAGGATATGTATTACAACCTCAATTTGATCAACAACAGCAACAATTTATACATGGCACACATTTCATTCACCATGCCCCTTCTGGTGCTGCGCCACTGTCTGCATTTTATCCTGTATATCCTTCCCAGCAGCAGATTCATCCCCAGCATCATCATCAGCTTGAACAGCAGTATCAGGTTTACTATGTTCCCAGCAGACAGACCCAACCTTACAACTTGTCTTCACAGCAGCCTAATATTAGTGAACCTCCTGCAACAATTCCTTCTAACCGCGCCCAGACAACACAGAATCCTGCTTTGGTTCAGCCATCTGCAGCTTATAACCCCATCAGAAATGCTCCGGTGCCTAAATCTGAAATGACAGCAGGTGCATATAGAACAGCATATTCGGCCACCCCTCAAGTGGTTCAAGTTGCTTCTGGTCAGCCTCAGCAGCAATTTGTTGCCTATTCCCAGTATCATCATCCATCTCAGGCTGCTGCCCCCAATTCTGCTGCCTCGGCTAGTTATGCTTACGAGTATGCAGATCCTGCTCACGCCCAGATATACTTCTCTCAGCCTCTGGCACCCACAATGCCTTCACAGTACCAAACTATGACGGGTGCTGCCGCTGCAGGACATCCAGATGTTTCTGCCCAGCCACCCTCAGACAGCATGAAGCAGCAGATAAGAACATCACAGCCACAGTAA	2145	0.5049	MEVPSAVQPLSSAPPPQTPHLNYPESVDSSPRSRNTDSWDEPVPPAAAAAASSKLRFMCSYGGHIVPRPHDKSLCYVGGETRIVVVERNTSLSDLSSRLSKTFLNGRPFTLKYLLPTEDLDSLISVTTDEDLDNMIDEYDRISNSSLKPSRIRLFLFTAKPDSTQSIPIINSSAKSEDWFLGMLNRGFXDSGSVNLLMGFDDELGAGNLDGGSKDVEPVSSGSFGNGKSAKQHGQDVHSVPDSPMLETTSSFGSTSSSPSVANLPPIRVHIDDGSGGGARVQDQKAVGIEDQLAQMGVGGGQKQDEGFLMSSPPTMPASTVPAGVPVGSSVPPGEYQNRVVSDDERSDYGVLGGYRKPPPPQPQTVPQPQILHTQLQQKPTGGVDLPSPDSVSSDSSMKNAMSRPQPMVYQDQAQLQIPSGAARVPSNQVDPKLMSDSHGRIQMQQQVLEQGYVLQQQFDHHQQQQQQPPQQQHQFIHGTQQQVQEAGYVLQPQFDQQQQQFIHGTHFIHHAPSGAAPLSAFYPVYPSQQQIHPQHHHQLEQQYQVYYVPSRQTQPYNLSSQQPNISEPPATIPSNRAQTTQNPALVQPSAAYNPIRNAPVPKSEMTAGAYRTAYSATPQVVQVASGQPQQQFVAYSQYHHPSQAAAPNSAASASYAYEYADPAHAQIYFSQPLAPTMPSQYQTMTGAAAAGHPDVSAQPPSDSMKQQIRTSQPQ	715

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4443g00005	715	CDD	PB1_UP2	58	157	-	-
	Pral4443g00005	715	MobiDBLite	consensus disorder prediction	673	687	-	-
	Pral4443g00005	715	MobiDBLite	consensus disorder prediction	242	263	-	-
	Pral4443g00005	715	SUPERFAMILY	CAD & PB1 domains	70	166	-	-
	Pral4443g00005	715	PANTHER	OS05G0427100 PROTEIN-RELATED	23	498	-	-
	Pral4443g00005	715	MobiDBLite	consensus disorder prediction	671	715	-	-
	Pral4443g00005	715	MobiDBLite	consensus disorder prediction	700	715	-	-
	Pral4443g00005	715	Pfam	PB1 domain	70	157	IPR000270	GO:0005515
	Pral4443g00005	715	ProSiteProfiles	PB1 domain profile.	54	157	IPR000270	GO:0005515
	Pral4443g00005	715	MobiDBLite	consensus disorder prediction	555	577	-	-
	Pral4443g00005	715	MobiDBLite	consensus disorder prediction	455	480	-	-
	Pral4443g00005	715	MobiDBLite	consensus disorder prediction	207	282	-	-
	Pral4443g00005	715	SMART	PB1_new	69	159	IPR000270	GO:0005515
	Pral4443g00005	715	MobiDBLite	consensus disorder prediction	22	37	-	-
	Pral4443g00005	715	MobiDBLite	consensus disorder prediction	1	45	-	-
	Pral4443g00005	715	Gene3D	-	74	159	-	-
	Pral4443g00005	715	MobiDBLite	consensus disorder prediction	298	403	-	-
	Pral4443g00005	715	MobiDBLite	consensus disorder prediction	368	403	-	-
	Pral4443g00005	715	MobiDBLite	consensus disorder prediction	219	233	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4443g00005	Pral-Chr4443	71660	74178	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4443g00005	46	201	MAP Kinase Kinase Kinase	AT1G79570	33.974	2.30e-25	110

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4443g00005	-		-	pcin:129311703	1090.1