Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4441g00062 ATGGAAAGAGCTTGTGAATTCTGCACGTCTTTGAGGCCAGTGGTTTATTGTAAAGCTGATGAAGCATATCTTTGTCTATCCTGTGACGCAAAGGTCCACAAAGCCAATGCACTGTCCAGCCGCCACCTCAGAACTCTTGTATGTAACCTATGTAGAAACCATTTTGCTTATGTGCAGTGTTTGGATCACCAAATTTTGATCTGCCGTGGCTGTGATCAGAAGCTGCATGATCCATCCTTAAAACACCAGAAACGAGCCATCAGAAGTTATATGGGTTGCCCTTCTGCCAAAGATTTTGCTGTACTCTGGGGTTTTGAATTAAATGAGATAGAAAACAGAAGTTCTACAGATTTGAATGCAGTAAATCTCTCGGGAAAGTCTGGTGATCAAACTGGAGGCCGTTCAATGGTATCTGGGGCCAAATTTGATGGGGCATCTAGCAGTCGACAAAGTCAGAAATTGTTAAAAGATCAAGAGAGACAAATTATTTTGCAGCAAATTATTGATTTGAAAAGACTTCAGGTCTGTGAGAACACTAATCATTCTGCCCTGATAAATGGGCTGCAAGAAACAGTCTCATCTTCTTCGATGCATCATACCCGAAAGAACTATGATGAAAAATGTGACCGGCATACACAAAATCCCCAGGATTTTAATAATAATCTTCAGGAAAGAGACAGCCCCGCGGCAGAACTGAGGCTTGAAAGTTTGTCATCCACATTCTCTGAACTTGATAACTTACCTTCACCTCCAATGGCAGACCTTCCCTTAAACAGCGAGGTCTTTTGGACTTGCAAAAGTCCATCTCAAAGCAATCAGTTATGGTCTCATCATATTCAAGACCTTGGGATATGTGAAGAACTAATTTGTCAAGATGATTTTAACATACCTGACGTTGACTTAACATTCCAAAACTTTGAAGAATTATTTGGAGGAGATCAAGATCCAGTTAGAGGACTGGTTGGTGATGATGATGTGTCTTGCTCTTCTATAGAGAAGGATATATCACTTGATAAGTCAGATATCTTCAATGAAAGAACAATGGAGGATTCTTCGGAAGCTGTATCCATGTCTATCTCCCAGTCTGCTAATGAGGACAAGGATATTGCTCCTTCCAACCAGTATGATCCAATAAACATGGACCTTTCTCAAAAAATTAGAGCATCTCAGTCAACCATGTCATTCTTTGTTTCAAGATTTACCCCTGAAAACAGTTGTACTGATCACCATGACACTGGTCTTTCTCCTCACAGTGAAGCGAAAGGAAAGTCCAGCTATTTCCTAGAACTGGAAGTTTCGACCATGGAGACTGGAGGAAATGACACTGTGAGGATTAAAGATAAGAACTCTCATCAGCGTGAAAAGCAAGCTCGAGGGCAAACCAGAAAACCTGGGACTAATGTAAGGAAGAGGATGAAAGGCCAAACTGCCAAAGCAGAAAGCTATTGA 1449 0.4113 MERACEFCTSLRPVVYCKADEAYLCLSCDAKVHKANALSSRHLRTLVCNLCRNHFAYVQCLDHQILICRGCDQKLHDPSLKHQKRAIRSYMGCPSAKDFAVLWGFELNEIENRSSTDLNAVNLSGKSGDQTGGRSMVSGAKFDGASSSRQSQKLLKDQERQIILQQIIDLKRLQVCENTNHSALINGLQETVSSSSMHHTRKNYDEKCDRHTQNPQDFNNNLQERDSPAAELRLESLSSTFSELDNLPSPPMADLPLNSEVFWTCKSPSQSNQLWSHHIQDLGICEELICQDDFNIPDVDLTFQNFEELFGGDQDPVRGLVGDDDVSCSSIEKDISLDKSDIFNERTMEDSSEAVSMSISQSANEDKDIAPSNQYDPINMDLSQKIRASQSTMSFFVSRFTPENSCTDHHDTGLSPHSEAKGKSSYFLELEVSTMETGGNDTVRIKDKNSHQREKQARGQTRKPGTNVRKRMKGQTAKAESY 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4441g00062 482 MobiDBLite consensus disorder prediction 349 369 - -
Pral4441g00062 482 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 480 - -
Pral4441g00062 482 MobiDBLite consensus disorder prediction 348 377 - -
Pral4441g00062 482 SMART bboxneu5 1 47 IPR000315 GO:0008270
Pral4441g00062 482 SMART bboxneu5 48 87 IPR000315 GO:0008270
Pral4441g00062 482 MobiDBLite consensus disorder prediction 441 460 - -
Pral4441g00062 482 MobiDBLite consensus disorder prediction 437 482 - -
Pral4441g00062 482 CDD Bbox1_BBX-like 4 47 - -
Pral4441g00062 482 MobiDBLite consensus disorder prediction 119 134 - -
Pral4441g00062 482 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Pral4441g00062 482 MobiDBLite consensus disorder prediction 119 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4441g00062 Pral-Chr4441 820451 824427 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4441g00062 1 317 C2C2-CO-like Transcription Factor Family AT1G68190 38.769 3.20e-63 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4441g00062 - - gmx:100819787 525.783