Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4441g00060 ATGGAAAGAGCTTGTGAATTCTGCACGTCTTTGAGGCCAGTGGTTTATTGTAAAGCTGATGAAGCATATCTTTGTCTATCCTGTGACGCAAAGGTCCACAAAGCCAATGCACTGTCCAGCCGCCACCTCAGAACTCTTGTATGTAACCTATGTAGAAACCATTTTGCTTATGTGCAGTGTTTGGATCACCAAATTTTGATCTGCCGTGGCTGTGATCAGAAGCTGCATGATCCATCCTTAAAACACCAGAAACGAGCCATCAGAAGTTATATGGGTTGCCCTTCTGCCAAAGATTTTGCTGTACTCTGGGGTTTTGAATTAAATGAGATAGAAAACAGAAGTTCTACAGATTTGAATGCAGTAAATCTCTCGGGAAAGTCTGGTGATCAAACTGGAGGCCGTTCAATGGTATCTGGGGCCAAATTTGATGGGGCATCTAGCAGTCGACAAAGTCAGAAATTGTTAAAAGATCAAGAGAGACAAATTATTTTGCAGCAAATTATTGATTTGAAAAGACTTCAGGTCTGTGAGAACACTAATCATTCTGCCCTGATAAATGGGCTGCAAGAAACAGTCTCATCTTCTTCGATGCATCATACCCGAAAGAACTATGATGAAAAATGTGACCGGCATACACAAAATCCCCAGGATTTTAATAATAATCTTCAGGAAAGAGACAGCCCCGCGGCAGAACTGAGGCTTGAAAGTTTGTCATCCACATTCTCTGAACTTGATAACTTACCTTCACCTCCAATGGCAGACCTTCCCTTAAACAGCGAGGTCTTTTGGACTTGCAAAAGTCCATCTCAAAGCAATCAGTTATGGTCTCATCATATTCAAGACCTTGGGATATGTGAAGAACTAATTTGTCAAGATGATTTTAACATACCTGACGTTGACTTAACATTCCAAAACTTTGAAGAATTATTTGGAGGAGATCAAGATCCAGTTAGAGGACTGGTTGGTGATGATGATGTGTCTTGCTCTTCTATAGAGAAGGATATATCACTTGATAAGTCAGATATCTTCAATGAAAGAACAATGGAGGATTCTTCGGAAGCTGTATCCATGTCTATCTCCCAGTCTGCTAATGAGGACAAGGATATTGCTCCTTCCAACCATGAAGCGAAAGGAAAGTCCAGCTATTTCCTAGAACTGGAAGTTTCGACCATGGAGACTGGAGGAAATGACACTGTGAGGATTAAAGATAAGAACTCTCATCAGCGTGAAAAGCAAGCTCGAGGGCAAACCAGAAAACCTGGGACTAATGTAAGGAAGAGGATGAAAGGCCAAACTGCCAAAGCAGAAAGCTATTGA 1317 0.4138 MERACEFCTSLRPVVYCKADEAYLCLSCDAKVHKANALSSRHLRTLVCNLCRNHFAYVQCLDHQILICRGCDQKLHDPSLKHQKRAIRSYMGCPSAKDFAVLWGFELNEIENRSSTDLNAVNLSGKSGDQTGGRSMVSGAKFDGASSSRQSQKLLKDQERQIILQQIIDLKRLQVCENTNHSALINGLQETVSSSSMHHTRKNYDEKCDRHTQNPQDFNNNLQERDSPAAELRLESLSSTFSELDNLPSPPMADLPLNSEVFWTCKSPSQSNQLWSHHIQDLGICEELICQDDFNIPDVDLTFQNFEELFGGDQDPVRGLVGDDDVSCSSIEKDISLDKSDIFNERTMEDSSEAVSMSISQSANEDKDIAPSNHEAKGKSSYFLELEVSTMETGGNDTVRIKDKNSHQREKQARGQTRKPGTNVRKRMKGQTAKAESY 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4441g00060 438 MobiDBLite consensus disorder prediction 348 376 - -
Pral4441g00060 438 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 436 - -
Pral4441g00060 438 MobiDBLite consensus disorder prediction 397 416 - -
Pral4441g00060 438 SMART bboxneu5 1 47 IPR000315 GO:0008270
Pral4441g00060 438 SMART bboxneu5 48 87 IPR000315 GO:0008270
Pral4441g00060 438 MobiDBLite consensus disorder prediction 393 438 - -
Pral4441g00060 438 CDD Bbox1_BBX-like 4 47 - -
Pral4441g00060 438 MobiDBLite consensus disorder prediction 119 134 - -
Pral4441g00060 438 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Pral4441g00060 438 MobiDBLite consensus disorder prediction 349 367 - -
Pral4441g00060 438 MobiDBLite consensus disorder prediction 119 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4441g00060 Pral-Chr4441 820451 824579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4441g00060 1 317 C2C2-CO-like Transcription Factor Family AT1G68190 38.769 9.58e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4441g00060 - - gmx:100819787 479.174