Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4441g00042 ATGGGGCGAGAAAGTCACAAAATGAAGGCATTAAGCCTTCTGAGAAGTAGAATCTGTGACCCCAAATTTGTATTCAAGCCTCTCCACGATTCTCCGGACAGCAACTACAGTAAACTGAAATTCATGATATCAAGTTCAATTACTGAGGCATGCAATAATTCTATTCTGCTCCTTGGTCCCCGTGGCTCTGGGAAATCTGCGGTTCTGGAGCTTGTTGTTGGAGATTTATTGGTGGAGTATCCGGACATGATTTCAGTGATCAAGTTGAGTGGGCTTTTACATAGCGATGACAACTGTGCATTAAAGGAAGTAGCTAGGCAGTTATGCATGGAGCATCAATTGCAATTCTCAAAAGCGGCATCGTTTGACGACAACTCTCAATTCATGGTAGCAATGCTAAAGGAGTGTGGATTAGCACATAAAACAATTGTATTTATTCTGGATGAGTTTGACCAGTTTGCCCAGGATGCAGATCAGCTATTGGAGAAAAGAGTACGATCCCGTTTTTCACATAGAAAGTTATTGTTCCTTCCACCTTCTACAGAAGACTCAAAGAGAATTTTGGAGCAAGTTCTGTCATTACCAGTGGATTCAAGTTTTCCACATGATTATGCTGTTGAATTTAATAGAAAGGTTCAAGATATTTTGGAAGATAGGAGGTTCAAAGAAACCTTCAATAAATATTTGAATTTGGACTCCTCAATCAAACATTTGCTGAGGTTTCTATTTTGTGCTGTCTCATGTATGGATGTGCAGACTGGCTTTTTGACATACGAGAACTTTGAAACGGCGTTTTCAAGTATTCTGAGGCAACCCAAACTGGAATGTTTAAAAAATTGCTCCATATTAGAACTTTACATCCTGGTTTGCATGAAGAGGTTGGAAGTTAAAGAACAGACCTTGTGCAACTTCAATTCTATTATGAAAGAGTATAAAAATGTGCACGATTCCTTCCAGACTTCTGATTATTATGCACGAAATGTCTGCTTAAGGGCATTTGAACATCTTATCAACCGTGAACTGATATGTTTCACAGACAGCAGAGGATATGGTTCATCGGTCGAGTTCCGCCCTGTAAAGCTTTTAATCTCTTCTGCTGAACTACACCAAGGACTAAAAGCATATCATTCATGCCCCGCTATCCTTCACAAGTTAATGGATCGTGAAGGCTAA 1173 0.3973 MGRESHKMKALSLLRSRICDPKFVFKPLHDSPDSNYSKLKFMISSSITEACNNSILLLGPRGSGKSAVLELVVGDLLVEYPDMISVIKLSGLLHSDDNCALKEVARQLCMEHQLQFSKAASFDDNSQFMVAMLKECGLAHKTIVFILDEFDQFAQDADQLLEKRVRSRFSHRKLLFLPPSTEDSKRILEQVLSLPVDSSFPHDYAVEFNRKVQDILEDRRFKETFNKYLNLDSSIKHLLRFLFCAVSCMDVQTGFLTYENFETAFSSILRQPKLECLKNCSILELYILVCMKRLEVKEQTLCNFNSIMKEYKNVHDSFQTSDYYARNVCLRAFEHLINRELICFTDSRGYGSSVEFRPVKLLISSAELHQGLKAYHSCPAILHKLMDREG 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4441g00042 390 Gene3D - 33 178 IPR027417 -
Pral4441g00042 390 PIRSF ORC4 154 390 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Pral4441g00042 390 PIRSF ORC4 3 159 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Pral4441g00042 390 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 194 IPR027417 -
Pral4441g00042 390 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 155 389 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Pral4441g00042 390 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 187 370 IPR032705 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4441g00042 Pral-Chr4441 633521 639398 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4441g00042 1 387 Core DNA Replication Machinery Family AT2G01120 57.683 0.0 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4441g00042 K02606 - gmx:100800582 590.112