Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4439g00007 ATGGCTGGTTTTGGCGGGAAAAAGGTGCGCCAAATGCTCGGAGGCAATGGTCTGGGCCACGTCATCGCTGCGGCGGCCGTTACTCTCCTCCTCCGCCTATTCTCTAGTCCTGCACCTGCCGCACTCTTGCCGGAAAACGAGAATGACGACCCCTGCGATAAGGAGGAGGATGCCGACGCCGGTAAAGCTCCGGTTTCCGGAAAAGTTTCTCCAGTCACAATCCGTTGGAGCAATATCACGTGCTCCCTGTTCCGTAAATCCTCCGAGCCTGTGAAATTTTTGCTTAAAAATGTGAGTGGGGAAGCACAACCTGGAAGGCTATTAGCTATAATGGGGCCGTCGGGTTCAGGAAAAACTGCGTTGCTTGATGTTCTTGCAGGCCAGCTGGCGGCATCACCTCAGTTGCATTTGTCAGGCCTTTTGGAGTTCAACGGAAAGCCAAGTTCAAACAAAACTTTCAAGTTTGCTTATGTAAGACAGGAAGATCTATATTTCTCTCAGCTCACGGTGCGGGAAACACTGTCTCTTGCTTCAGAACTACAGCTTCCTGGCATTTCTGTTAAAGAGAGAGATGAATATGTGGATAATCTTCTGTTCAAACTAGGCCTGGTCAGTTGTGCTCATACTGAAGTTCTTGGAATCAGTAGTGGTGAAAAGAAGCGCCTAACTCTAGCAAGTGAGCTGATTGCATGCCCATCTGTAATATTTGCTGATGAACCCACCGCCGGACTTGATGCCTTCCAAGCTGAGAAAGTCATGGAGACTCTTCAACACCTGGCACATGATGGTCATACGGTAATTTGCTCTATACATCAGCCAAGAGGTTCAGTGTATAGCAAATTGGATGACATTGTCTTGCTAACAAAGGGTTCACTTATTTATGCTGGTCCTGCTCATAAAGAAATATTGACGTACTTCTCAAAATTTGGGTACCACTGCCCAGATCATGCGAGTCCTGCTGAATTTTTGGCTGATCTTGTATCCATTGACTATAGTTCTGCTGAAAGTGTCCATTCCTCTCAAAAAAGAGTTGATGGTCTTGTAGATTTATTCTCACAAAGACTACCTACGATAGTTTATGCAACTCCAATTGCAAGAGATGAGCTCTCCAAAGGTGTTAAAAAAATCAGCAAAAGAACTTTAGCTAGGAAGAAAGGAGGCTGGTGGAAACAATTCTGGTTGCTCCTCAGGCGAGCATGGATACAGGTCTTCCGTGATGGGCCAACAAACGAAGTATGGGCAAAAATATCATTTACATCAGCAATAACACTTGGGTCTGTTTTCTGGAAAATGGGAAGATCTCAGACTTCAATACAAGACAGAATGGGATTGCTTCAGGTTGCTGCAATAAGCTCAGCTATGGCAGCTCTCACAAAGACTACAGGACTGTTTCCAAAGGAACGTGCAGTTGTTGATAGAGAACGTACTAAGGGCTTATATGACGTGGGTCCTTATCTCTTTTCAAAATTGTTGGCTGAGATTCCCGTTGGAGCAGTGTTTCCATTGACGTTTTGTGCTATTTTATACCCCATGGCACGTCTTCATCCTACTTTGCTAAGATTTGGCAAATTCTGTGGTATTGTCACTATAGAATTTTTTGCTGCATCCGCAATGGGACTTGCTGTAGGGGCTATGGCTCCAACCACTGATGCAGCAATGATAGTGGGTCCCTCTCTTATGACAAGTTTTGCTGTATTTGGAGGCTACTACGTCAATCCTGAGAATACTCCAATCATCTTCCACTGGATTCCACGTGTTTCTCTGATTAGATGGGCCTTTCAGGGACTTTGCGTCAATGAGTTCAGGGATCTTCAATTTGATCATCAGCATCCATTTGATGTTCAAACTGGTGAACAGGCACTAGAGCGCATATCCTTTGGAGGACTTAGAATCAAGGATACGGTGATAGCACAAAGCAGAATACTGGTATTTTGGTATTGCACTGCCTACTTTCTCTTACGGATAAATAAGCCCAAGTACCAGCAACTTGAGCCACCCCTTTATCCCAACATGTCCCATGTAAAACTTGAAGAGTTAGACACAGATCATGTTGATCAGCCTCTTGATTCTTCATCAGTAGGTCAAGTTGAATCCAGCCTGCGGCTTCAATCTCCTCAGCTTGATCTTGTTGGATCCTTTATCCTAGAAGGTCTGTAA 2157 0.4492 MAGFGGKKVRQMLGGNGLGHVIAAAAVTLLLRLFSSPAPAALLPENENDDPCDKEEDADAGKAPVSGKVSPVTIRWSNITCSLFRKSSEPVKFLLKNVSGEAQPGRLLAIMGPSGSGKTALLDVLAGQLAASPQLHLSGLLEFNGKPSSNKTFKFAYVRQEDLYFSQLTVRETLSLASELQLPGISVKERDEYVDNLLFKLGLVSCAHTEVLGISSGEKKRLTLASELIACPSVIFADEPTAGLDAFQAEKVMETLQHLAHDGHTVICSIHQPRGSVYSKLDDIVLLTKGSLIYAGPAHKEILTYFSKFGYHCPDHASPAEFLADLVSIDYSSAESVHSSQKRVDGLVDLFSQRLPTIVYATPIARDELSKGVKKISKRTLARKKGGWWKQFWLLLRRAWIQVFRDGPTNEVWAKISFTSAITLGSVFWKMGRSQTSIQDRMGLLQVAAISSAMAALTKTTGLFPKERAVVDRERTKGLYDVGPYLFSKLLAEIPVGAVFPLTFCAILYPMARLHPTLLRFGKFCGIVTIEFFAASAMGLAVGAMAPTTDAAMIVGPSLMTSFAVFGGYYVNPENTPIIFHWIPRVSLIRWAFQGLCVNEFRDLQFDHQHPFDVQTGEQALERISFGGLRIKDTVIAQSRILVFWYCTAYFLLRINKPKYQQLEPPLYPNMSHVKLEELDTDHVDQPLDSSSVGQVESSLRLQSPQLDLVGSFILEGL 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4439g00007 718 Gene3D - 69 307 IPR027417 -
Pral4439g00007 718 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 314 IPR003439 GO:0005524
Pral4439g00007 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 305 IPR027417 -
Pral4439g00007 718 Pfam ABC-2 type transporter 391 601 IPR013525 GO:0016020|GO:0140359
Pral4439g00007 718 SMART AAA_5 104 291 IPR003593 GO:0016887
Pral4439g00007 718 ProSitePatterns ABC transporters family signature. 214 228 IPR017871 GO:0005524|GO:0016887
Pral4439g00007 718 Pfam ABC transporter 95 242 IPR003439 GO:0005524
Pral4439g00007 718 CDD ABCG_EPDR 71 296 - -
Pral4439g00007 718 MobiDBLite consensus disorder prediction 42 67 - -
Pral4439g00007 718 FunFam ABC transporter G family member 7 72 304 - -
Pral4439g00007 718 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 62 618 - -
Pral4439g00007 718 Pfam ABC-2 type transporter 271 329 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4439g00007 Pral-Chr4439 132320 139085 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4439g00007 84 304 Calmodulin-binding Proteins AT2G36910 25.541 2.44e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4439g00007 K05681 - gmx:100788256 1050.43