LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4432g00068	ATGATCTTCCCCACATCCATGATCATAAATCCCTCTCTTCTGATCCCTTTCGTCTTGTTTCTCCTCCCCTTGATCACCGCTCAATCAACCCGCCGCCACTGCCAACAGACATGCCCTCCTCAACACTCCCTCCTCCGCCTCCCTTACGCCTTTGGCTTCTCTTCCGGCTGCGCAATCCGACTCAACTGCACCCCCGACGGCACAATCCTCATCGGGGATTACCCGGTCCACTCCATTAACTCCGACACCATAATCGTCGGCGTCAAGTCCCAATGCAACCGTCCTTTTCATACCTTCCGTCAACTCTTCGGCCACAGATACGCGCCCACATCACGAAACGCCATACTTTTGCAAAATTGCGGCCAAAAGGTCTCCCCCTGCGTCATCCCGGCGACTATGGTGCAGACTCACTTCGAGTCGGAAAACTGCAGCTCCGGAGGTGGCAATTTGAGTTGCTATTACGAAAACTCTACTGTTGATTTTATGAATCTCCAGAATTTAACGAACAAGCGCTGTCAGTACCTTATTTCGTCGATAGCGGCTGAAGAGTTGAGGAACAATTCGTACATCAGTGTGGCGACGGCGGTGTCCTTGGAGGTTGAGACGATTGAGCTGGGATGGTGGCTGGAAGGAGAGTGCCAATGCTCCAACGATGCCAACTGTACGAGACTAAAATCTCCGATTGACAAGAAGGCGGGGTATCGGTGCCGTTGCAAGGAAGGATTCACGGGCGACGGGTATTTGGCCGGAAATGGTTGCCGGAAAGCCTCTTCATCCTGCAACCCAGCAAAGTACATGTCCGGCCAATGTGGAGGGACAACCCGATTTGTTGTCTTAATTGGAGGGATGGTCTTTGGAGCTTCACTAATGATCGGTTTTGGTCTAATATGTTGTTTCTTTCGGCGGCGCTCCAAATTAAGAGTCACGAAGAGCACAAAAAGGCGCTTGACCGAAGCTACCAGCAATTCCAGCGTTCCTATTTATACATACAAAGACATCGAGAGAGCCACGAATAACTTCTCAGATAAACAGAGGCTCGGAACTGGGGCATATGGGACTGTTTATGCTGGAAAACTTCACAGTCACGAATGGGTTGCCATTAAAAGGATCAAATACAGAGACACTGACAGTATTGAGAAAGTAATGAACGAGATCAAGCTCATTTCCTCAGTGAGCCATCCCAATCTTGTCCGCTTGTTGGGTTGCTCTCTCGAATATGGAGAACAAATCCTTGTCTACGAGTTCATGCCCAATGGAACGTTAAATCAACATCTGTTAAGGGAGAGAGGGACGGGACTTCCATGGCCGGTTCGACTCACTATTGCTGCTGAAACAGCACAAGCCATAACACATCTCCACTCTGCCATCAATCCCCCCATTTACCACAGAGACATCAAGTCAAGCAACATACTGTTGGACCACAATTTTAGATCAAAAGTTGCAGACTTTGGTCTTTCCAGACCTGGGATGACCGAAATATCTCACATTTCAACTGCCCCACAGGGAACGCCCGGCTATGTTGATCCACAGTACCATCAAGATTTTCACCTTTCCGATAAAAGTGATGTTTATAGCTTTGGGGTTGTTCTTGTTGAGATCATAACGGGATTGAAAGTGGTGGACTTTACTCGTCCCCAGAATGCAGTGAATTTGGCTTCTTTTGCTACAGACAGGATTAGGAAGGGGCTTTTGGATGAGATTATAGATCCATTCCTCCAAGCACATATGGACGATTGGACCCATTTCTCCGTACACAAGGCAGCTGAGCTAGCATTCCGATGCCTTGCATTCCACAGGGACATGAGGCCTTCCATGACAGAAGTTGCTGCTGAGCTAGAGCAGATCAGACTGAGTAGGTGGACAACCTTTGGAGATAGCAATCGTACAGCCTCAACAGAGCTGTCCTCTTCTTCTCCTTCCTCTGATGAAAGTGAGAAGCCTCTAAGTGCGAGAGAAAAGAAGGTGAAACCAGAGGGCAAAGGCCTTCTCAAGTTGCAGACTGAGCCTGCCGCGTTAAACTCAATTGAAAGGCGCAAGAACTGTTCCCCGGTCTCGGTGCAAGACCCGGACTTTTGGCTGAGCGAACAAAGCTCTCATTCAGCAAATAGTTTGGTGAGTAAGTCATTCGAGTGA	2133	0.488	MIFPTSMIINPSLLIPFVLFLLPLITAQSTRRHCQQTCPPQHSLLRLPYAFGFSSGCAIRLNCTPDGTILIGDYPVHSINSDTIIVGVKSQCNRPFHTFRQLFGHRYAPTSRNAILLQNCGQKVSPCVIPATMVQTHFESENCSSGGGNLSCYYENSTVDFMNLQNLTNKRCQYLISSIAAEELRNNSYISVATAVSLEVETIELGWWLEGECQCSNDANCTRLKSPIDKKAGYRCRCKEGFTGDGYLAGNGCRKASSSCNPAKYMSGQCGGTTRFVVLIGGMVFGASLMIGFGLICCFFRRRSKLRVTKSTKRRLTEATSNSSVPIYTYKDIERATNNFSDKQRLGTGAYGTVYAGKLHSHEWVAIKRIKYRDTDSIEKVMNEIKLISSVSHPNLVRLLGCSLEYGEQILVYEFMPNGTLNQHLLRERGTGLPWPVRLTIAAETAQAITHLHSAINPPIYHRDIKSSNILLDHNFRSKVADFGLSRPGMTEISHISTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFTRPQNAVNLASFATDRIRKGLLDEIIDPFLQAHMDDWTHFSVHKAAELAFRCLAFHRDMRPSMTEVAAELEQIRLSRWTTFGDSNRTASTELSSSSPSSDESEKPLSAREKKVKPEGKGLLKLQTEPAALNSIERRKNCSPVSVQDPDFWLSEQSSHSANSLVSKSFE	710

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4432g00068	710	Pfam	Protein kinase domain	341	609	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4432g00068	710	CDD	EGF	212	247	-	-
	Pral4432g00068	710	FunFam	Wall-associated receptor kinase-like 20	416	624	-	-
	Pral4432g00068	710	MobiDBLite	consensus disorder prediction	627	710	-	-
	Pral4432g00068	710	ProSitePatterns	Protein kinases ATP-binding region signature.	346	368	IPR017441	GO:0005524
	Pral4432g00068	710	ProSiteProfiles	Protein kinase domain profile.	340	617	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4432g00068	710	MobiDBLite	consensus disorder prediction	645	661	-	-
	Pral4432g00068	710	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	460	472	IPR008271	GO:0004672\|GO:0006468
	Pral4432g00068	710	SMART	serkin_6	340	621	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4432g00068	710	PANTHER	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4	13	656	IPR044652	GO:0004672
	Pral4432g00068	710	Gene3D	Transferase(Phosphotransferase) domain 1	416	632	-	-
	Pral4432g00068	710	FunFam	Wall-associated receptor kinase-like 14	307	415	-	-
	Pral4432g00068	710	Gene3D	Laminin	207	250	-	-
	Pral4432g00068	710	FunFam	Wall-associated receptor kinase-like 14 isoform A	213	248	-	-
	Pral4432g00068	710	SUPERFAMILY	Protein kinase-like (PK-like)	316	613	IPR011009	-
	Pral4432g00068	710	MobiDBLite	consensus disorder prediction	687	710	-	-
	Pral4432g00068	710	Gene3D	Phosphorylase Kinase; domain 1	301	415	-	-
	Pral4432g00068	710	MobiDBLite	consensus disorder prediction	627	644	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4432g00068	Pral-Chr4432	380037	384247	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4432g00068	45	705	Receptor kinase-like Gene Family	AT2G23450	51.714	0.0	670

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK_LRK10L-1	Pral4432g00068		Pkinase	3e-42	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4432g00068	-		-	gmx:100809858	956.436