Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4432g00059 ATGGGAGAAAATTGTGAAAGCTGTAGATCATGGGTAGACGACATTTACTGGACCCGTTTCCAATTCGTCCATTTTGCCTACTATCTTCCCAAGGGCTTTGATCGACAGCTTACACTGCCCAGAAGTTTTTCAGATAATTTAAGAAAGAAATTGCCAGATAATGTGACTCTGAGAGGTCCTGGTGGCGATGAGTGGAATGTTGGATTGACAACCACAAATGATACCTTGCATTTCACGCACGGCTGGCAACAATTTGTTGAAGATCACTGTTTGGAAGAGAATGATCTCCTGGTCTTCAAGTACAATAACGAATCGCAGTTTGATGTTCTAATATTTGGCCGGGGTGGCTCCTGTGAGAAGGCTGCTTCTTATTTTGTTAGGAAATGTGGGCATACAAATAAGAGAATCAGAGGTAACCGTTTGAAAGAAGTCAATTTCCGCTCTAATATTCCCACTGAACATGCTTCGCCTGAGAAGTTTGTGCATGGAGAGAGCATGGGAGTGCCGGCTGTCATCCCTTCTGAAATTAGTAGCAAAGAGGCCCGTGATGCTGGTGTGGAATTTGCCTCCCCTGTGACAGCAATTCCAGTGGCAGTTGCGGATGTCCAAACTAAGCAGAGGGGAGGAACCAGAGGATCTAAAACGCGCAGGGACAGAGCTAACTTGATTGCTGATGCTGAACCCTCATCTGCGAGCAGAAGTAAGACGAATGAAATTTATATTTCAAACAGAAGGCCTGTTACAGAAGATGAGAAAACGACTGCCCTCCAATTAGCTCAGGCAGCGTGTACTGACCAGGGTTTCTACATAATCATGCGTCCCACACATGTATACAAGAGATTCTATGCGTCAATCCCTAGCAAGTGGTTAGCGGAACATCTTTTTCCTCACTCTGAAGACGTCATATTGCGCACGGGAGGGAATGAATGGCATGCCAAATACAGCTTTGAACATGGTCGTCGAACTGGAGGACTGACTGGTGGGTGGAAACAGTTCGCTCTGGACAATAACCTGGAAGAATTTGATGTGTGTGTGTTTGAACTAGTTGGTCAAGGCAAGCCATTGATCATGGATGTGACAATATTCAGAGTTATTGAGGATTATTCTCCTCTGCAGAATGTGAGTTATGGAGGCAAACGAGGCCCGAATTGCATCCAATCATGGGAGGTCGATCCTTAA 1179 0.4529 MGENCESCRSWVDDIYWTRFQFVHFAYYLPKGFDRQLTLPRSFSDNLRKKLPDNVTLRGPGGDEWNVGLTTTNDTLHFTHGWQQFVEDHCLEENDLLVFKYNNESQFDVLIFGRGGSCEKAASYFVRKCGHTNKRIRGNRLKEVNFRSNIPTEHASPEKFVHGESMGVPAVIPSEISSKEARDAGVEFASPVTAIPVAVADVQTKQRGGTRGSKTRRDRANLIADAEPSSASRSKTNEIYISNRRPVTEDEKTTALQLAQAACTDQGFYIIMRPTHVYKRFYASIPSKWLAEHLFPHSEDVILRTGGNEWHAKYSFEHGRRTGGLTGGWKQFALDNNLEEFDVCVFELVGQGKPLIMDVTIFRVIEDYSPLQNVSYGGKRGPNCIQSWEVDP 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4432g00059 392 Gene3D - 19 116 IPR015300 -
Pral4432g00059 392 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 31 366 IPR044837 -
Pral4432g00059 392 SMART B3_2 25 115 IPR003340 GO:0003677
Pral4432g00059 392 SMART B3_2 268 365 IPR003340 GO:0003677
Pral4432g00059 392 SUPERFAMILY DNA-binding pseudobarrel domain 268 356 IPR015300 -
Pral4432g00059 392 ProSiteProfiles B3 DNA-binding domain profile. 22 115 IPR003340 GO:0003677
Pral4432g00059 392 ProSiteProfiles B3 DNA-binding domain profile. 268 365 IPR003340 GO:0003677
Pral4432g00059 392 SUPERFAMILY DNA-binding pseudobarrel domain 21 115 IPR015300 -
Pral4432g00059 392 CDD B3_DNA 32 112 IPR003340 GO:0003677
Pral4432g00059 392 CDD B3_DNA 268 363 IPR003340 GO:0003677
Pral4432g00059 392 Pfam B3 DNA binding domain 34 112 IPR003340 GO:0003677
Pral4432g00059 392 Pfam B3 DNA binding domain 268 363 IPR003340 GO:0003677
Pral4432g00059 392 Gene3D - 246 368 IPR015300 -
Pral4432g00059 392 MobiDBLite consensus disorder prediction 203 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4432g00059 Pral-Chr4432 330029 333152 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4432g00059 1 363 REM Transcription Factor Family AT4G33280 33.506 8.50e-69 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Pral4432g00059 B3 8.7e-14 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4432g00059 - - pcin:129301699 671.389