Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4432g00055 ATGGATGCTGATCAAGCATTGAGTGGTGCTTCCAGGCCTCAACAGAGCTTGGGGTTCCCTCCCCCGCAGCGCAGCGAACCCTTGCCATGTCCTCGTTGCGACTCCACAGCTACCAAGTTCTGCTACTACAACAACTACAACCTTTCCCAGCCGCGTTACTTGTGCAAGTCTTGCCGTCGCTACTGGACCCACGGCGGCACACTCCGCAACGTTCCCGTCGGCGGTGCCACTCGCAAGATTTCTAAGAAGCCGCGCGCTCCCTCTTCTTCTTGCACTGTACCATCCCCCACCACTGCCCGCGGAACATCGACGGCCTGTCCTTCGTTTGGATTAACTGGGTTTTCATACGAGTTTGTTCGTGGACAGACTGGGGCTTTTCCCGAGTTCCCTGCTCCCCACTCTGACTATAGCGCATGGCATGAACTTACTCTGCTCCGCCATCCTCCCAATAGCCTCAACTAG 462 0.5671 MDADQALSGASRPQQSLGFPPPQRSEPLPCPRCDSTATKFCYYNNYNLSQPRYLCKSCRRYWTHGGTLRNVPVGGATRKISKKPRAPSSSCTVPSPTTARGTSTACPSFGLTGFSYEFVRGQTGAFPEFPAPHSDYSAWHELTLLRHPPNSLN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4432g00055 153 MobiDBLite consensus disorder prediction 83 99 - -
Pral4432g00055 153 MobiDBLite consensus disorder prediction 73 99 - -
Pral4432g00055 153 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 21 99 IPR045174 GO:0003700|GO:0006355
Pral4432g00055 153 Pfam Dof domain, zinc finger 27 82 IPR003851 GO:0003677|GO:0006355
Pral4432g00055 153 MobiDBLite consensus disorder prediction 1 28 - -
Pral4432g00055 153 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Pral4432g00055 153 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4432g00055 Pral-Chr4432 302619 303523 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4432g00055 21 92 C2C2-Dof Transcription Factor Family AT5G66940 69.444 1.73e-33 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pral4432g00055 zf-Dof 8.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4432g00055 - - qsa:O6P43_016107 150.984