Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4432g00053 ATGGCTATCCGGGTTACTTTTAGCTATTCTGGCTATGTCGCCCGAAGCTTGGTTTCGACGGCCGTTGTTCGTTGTTCGTGCACGTCTACCCCATGCTTCCAAGAATGCTGGAGCCGGTCTCGCATGTTTTGTCCTGGCCAACAGAAGCATGATGTCAATTCCTCCTCCCCTTGCGGCGTGCGTAGTTACCATTCCAATTTCAGGCGACCCAAAACCAATTGCTGTGCTGGAAATTCAGCATCTACCTGTACGACTCTCGCGGCGAGAATTCTGGGTGATAATTCTAAAAACCCGTTCGTTTCGGGTTTGATTTCGATGATGAGTTCAACTATTGGTGTATCTGGTTCATGTGGCGTGGGTACAGCTGTTTGCGATATTTCCCCGTGGAAACCTACTTCAATTATACCCTTTCTACAGGGGTCGAAGTGGCTTCCTTGTAACCAGTCGATTCCCTTCATCGCAAGCTGTGTGAAGGATAAAGGCGAAACACGTGGCTTTAGCGCGAAAGATAACGAGGGGTCGGGGTACACTTCTAAGGATGTTGAGAAGACAAGCTGGCTTTTGCGCTTTTTACGAATCTGTTCTGAGGATGCGAAAGCTGTGTTTACTGCCGCTACTGTTAGTTTTCTCTTCCGATCATTCCTGGCTGAACCGAGATCGATTCCCTCGTCCTCAATGTACCCAACTCTGAATGTAGGTGACCGTATTTTGGCGGAGAAGATTTCCTTCTTCTTTAGAAGGCCTGATATTTCCGATATAGTGATTTTTAAGGCGCCTCCTATTTTGCAGGAAATTGGTTATGGTTCAGGCGATGTATTTATAAAAAGAATTGTGGCGAAGGCTGGGGACTGTGTTGAGGTTCTTGATGGAAAGTTACTGGTTAATGGTATTGCTCAAGAAGAAGAATTCATTTTGGAGCCACTCGCTTATGACATGGATCCGCTGGTTGTGCCTGAAGGTTATGTCTTTGTGATGGGAGACAATCGCAATAATAGCTTTGATTCGCATAACCGGGGTCCGCTACCTATTAAGAACATTGTTGGTAGATCCATGTTTCAATACTGGCCTCCATCCAAAGTATCCGAGACTTGCAAACTGACTCCTGCAAATAATTGTGTGGCAATTTCTTGA 1131 0.4607 MAIRVTFSYSGYVARSLVSTAVVRCSCXTSTPCFQECWSRSRMFCPGQQKHDVNSSSPCGVRSYHSNFRRPKTNCCAGNSASTCTTLAARILGDNSKNPFVSGLISMMSSTIGVSGSCGVGTAVCDISPWKPTSIIPFLQGSKWLPCNQSIPFIASCVKDKGETRGFSAKDNEGSGYTSKDVEKTSWLLRFLRICSEDAKAVFTAATVSFLFRSFLAEPRSIPSSSMYPTLNVGDRILAEKISFFFRRPDISDIVIFKAPPILQEIGYGSGDVFIKRIVAKAGDCVEVLDGKLLVNGIAQEEEFILEPLAYDMDPLVVPEGYVFVMGDNRNNSFDSHNRGPLPIKNIVGRSMFQYWPPSKVSETCKLTPANNCVAIS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4432g00053 377 SUPERFAMILY LexA/Signal peptidase 213 361 IPR036286 -
Pral4432g00053 377 Pfam Signal peptidase, peptidase S26 199 356 IPR019533 GO:0004252|GO:0006465
Pral4432g00053 377 PRINTS Bacterial leader peptidase 1 (S26A) family signature 318 337 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pral4432g00053 377 PRINTS Bacterial leader peptidase 1 (S26A) family signature 215 231 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pral4432g00053 377 PRINTS Bacterial leader peptidase 1 (S26A) family signature 274 286 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pral4432g00053 377 CDD S26_SPase_I 218 350 IPR019533 GO:0004252|GO:0006465
Pral4432g00053 377 ProSitePatterns Signal peptidases I serine active site. 224 231 IPR019756 GO:0004252|GO:0016020
Pral4432g00053 377 PANTHER SIGNAL PEPTIDASE I 184 363 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pral4432g00053 377 FunFam Peptidase/ serine-type peptidase 224 355 - -
Pral4432g00053 377 NCBIfam signal peptidase I 201 357 IPR000223 GO:0006508|GO:0008236|GO:0016020
Pral4432g00053 377 ProSitePatterns Signal peptidases I signature 3. 323 336 IPR019758 GO:0004252|GO:0016020
Pral4432g00053 377 Gene3D Umud Fragment, subunit A 212 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4432g00053 Pral-Chr4432 294319 297424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4432g00053 227 357 MADS-box Gene Family AT1G29960 34.586 4.92e-14 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4432g00053 K03100 - qsa:O6P43_018882 452.981