LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4432g00020	ATGGATAAGGGGCGGGTTTTGTTGTGCCGAGGTATTGGAATTCTCGAAATGGGTAGGTGTTGGTTGGTTGGGATTTTGATTGTTTTGGCCAATGCGTGGTCCTTGGTCCAAGGCTACCCCTCAGAAGATCTGGTGGTGACTCTTCCTGGCCAACCCAAGGTTGAGTTTAGGCAGTATGCTGGGTACGTTGATGTGGATGTTAACCATGGAAGGAGTTTGTTCTACTACTTTGTGGAGGCAGATAAGCACGCCGACCAGAAGCCCCTTACTCTCTGGCTCAATGGAGGTCCGGGATGTTCTTCCATCGGAGGAGGTGCCTTCACTGAATTGGGCCCCTTCTATCCTCATGGTGATGGCCGTAGGCTCCGAAGAAATAGAATGTCTTGGAATAGAGCATCTAACCTCTTGTTTGTGGAGTCCCCTGCTGGAGTTGGATGGTCATACTCAAATACGACTTCAGATTATAACTGCGGAGATGCTTCCGCCGCCAATGATATGTACTTATTCATGTTGAAATGGTACGAGAAATTCCCTACATTCAGAACAAGGGCGCTGTTCCTTACTGGAGAAAGCTATGCAGGACATTACATACCGCAGTTGGCTAATGCTCTGCTGAACCATAACGAAGCCTCGAGCGACTTCAAATTCAATATTAAAGGAGTTGCTATCGGAAACCCACTGCTGAAACTTGATCGGGACATTCCATCAACCTATGAATTCTTCTGGTCGCACGGGATGATTTCTGATGAAATAGGCCTTGCCATCACGAATGAGTGCGATTTTGATGATTATGCGTTTGCAAGCCCTCACAATGTGTCCCACTCATGCAACCGTGCCATATCAGAGGCAAATCGCGTAGTTGGGGAATATATCAACAACTATGATGTGATTCTGGATGTCTGCTACCCATCCATTGTTGAGCAAGAACTGAGATTAAAAAAGATGGCCACCAAGATGAGTTTGGGCATAGATGTCTGTATGAGTCTTGAAAGACGTTTTTACCTCAATCTTCCTGAGGTTCAGAAGGCTCTGCATGCTAATCGTACCAATCTGCCATATTCCTGGTCTATGTGTAGCGCCATTTTAAATTATAGCGACACCGATGGGAACATCAATATCCTTCCGATTCTCAAGAGGATCGTTGAGAATAAAATCCCAGTTTGGGTCTTCAGTGGAGACCAAGATTCTGTGGTGCCATTATTGGGTTCTCGAACGCTGATTCGTGAGCTAGCCCATGATCTGAAGTTTGAGGTGACGGTGCCATATGGAGCATGGTTCCACAAAGGGCAGGTTGGGGGTTGGGCAACGGAGTATGGAAACTTGTTGACTTTTGCGACGGTGAGAGGGGCTGCCCACATGGTGCCCTATGCACAGCCTTCAAGATCTCTCCATCTCTTCAGTTCATTTGTGCGTGGCCGCCGATTGCCCAACGCCACCCGTCCTTCCATTGATGGATAG	1458	0.4753	MDKGRVLLCRGIGILEMGRCWLVGILIVLANAWSLVQGYPSEDLVVTLPGQPKVEFRQYAGYVDVDVNHGRSLFYYFVEADKHADQKPLTLWLNGGPGCSSIGGGAFTELGPFYPHGDGRRLRRNRMSWNRASNLLFVESPAGVGWSYSNTTSDYNCGDASAANDMYLFMLKWYEKFPTFRTRALFLTGESYAGHYIPQLANALLNHNEASSDFKFNIKGVAIGNPLLKLDRDIPSTYEFFWSHGMISDEIGLAITNECDFDDYAFASPHNVSHSCNRAISEANRVVGEYINNYDVILDVCYPSIVEQELRLKKMATKMSLGIDVCMSLERRFYLNLPEVQKALHANRTNLPYSWSMCSAILNYSDTDGNINILPILKRIVENKIPVWVFSGDQDSVVPLLGSRTLIRELAHDLKFEVTVPYGAWFHKGQVGGWATEYGNLLTFATVRGAAHMVPYAQPSRSLHLFSSFVRGRRLPNATRPSIDG	485

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4432g00020	485	PRINTS	Carboxypeptidase C serine protease (S10) family signature	173	198	IPR001563	GO:0004185\|GO:0006508
	Pral4432g00020	485	PRINTS	Carboxypeptidase C serine protease (S10) family signature	138	148	IPR001563	GO:0004185\|GO:0006508
	Pral4432g00020	485	PRINTS	Carboxypeptidase C serine protease (S10) family signature	125	137	IPR001563	GO:0004185\|GO:0006508
	Pral4432g00020	485	PRINTS	Carboxypeptidase C serine protease (S10) family signature	442	455	IPR001563	GO:0004185\|GO:0006508
	Pral4432g00020	485	FunFam	Carboxypeptidase	39	303	-	-
	Pral4432g00020	485	ProSitePatterns	Serine carboxypeptidases, serine active site.	187	194	IPR018202	GO:0004185
	Pral4432g00020	485	Gene3D	alpha/beta hydrolase	40	302	IPR029058	-
	Pral4432g00020	485	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	46	459	IPR001563	GO:0004185\|GO:0006508
	Pral4432g00020	485	FunFam	Carboxypeptidase	373	472	-	-
	Pral4432g00020	485	Gene3D	-	326	362	-	-
	Pral4432g00020	485	Gene3D	-	373	472	-	-
	Pral4432g00020	485	Pfam	Serine carboxypeptidase	50	472	IPR001563	GO:0004185\|GO:0006508
	Pral4432g00020	485	SUPERFAMILY	alpha/beta-Hydrolases	41	475	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4432g00020	Pral-Chr4432	138211	141896	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4432g00020	332	475	Calmodulin-binding Proteins	AT2G22960	25.694	2.01e-11	61.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4432g00020	K16297		-	qsa:O6P43_019848	823.928