Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4432g00002 ATGAAGTTAAGCCGTGTAATCACGTTGAGCTTGTTCATAGCTGCAGCAGCGGTTACATCGGTGGCCGGTCAGGCCAAACCGGGTTGCAGCGGCGCGTGCGGCCACCTTGACATCCCCTACCCATTCGGTTCAAGAGAAGGGTGCTATAGAGATGAGAACTTCCTCATATCCTGCGACACCTCCTCTGCCAAACCAATAGCAAATTACTCCAATAGCAACATCCAAGTGTTACACGTCTCTCTCGACGGTCAGTTGCGCCTTTCCGGCTGGGTTGGCTGGGATTGTTACGTTCCCTCTGCTCGCTGGAACTTCATATCCTTTAAACTCCGCCGGTTTGCTATATCCAACACCAAGAACAAGTTCACTGTCATTGGCTGCGATACCCGTGCTTTCGTTTATGATTTTTGGGGAAGAAGGTTCAGCACTGGCTGTACGTCCTTTTGCAGAGACGTTGCTGACCTGGTCAATGGAAGTTGCTCTGGGATTGGCTGCTGCCAAACCAGTTTTCCCACAGGAAACTTGGGTTACAATATCAGCATTTTCAGCTATCGCAACCACTCTCAAGTGTTGGACTTTAATCCTTGCAGCTACGCTTTTGTGGTCGAAGACGGTGCTTTCAATTTCTCTTCTCTAGATCTCCTCGATCTGCGAGGCAAAAGAGACTTTCCTATGATCATTGATTGGGCTATTTGGGGTGAGAATTGCTCCGAAGCAGTGAAGAACAGAAGCAGCTATGCTTGCATGGACAATAGCTTCTGCGTTGATTCACAAAATGTTCGTGGCTACCTCTGCAGATGCAACGAAGGGTTTCGAGGGAATCCTTACCTGTCTGGTTCTGATGGTTGCCGAGATATCGACGCGTGCAGCAACAGCACATTAAATCTCTGCAGTCAAACGTGCCACAACTTGTACGGCACCTACAACTGTTCTTGCCTGCCGGGATACATAGGCAACGGTTTCAAGAACGGAACAGGATGCCTTTTAGTGGATAAATCCAATAATGTCCCAATCACTGAAGTTGCTCTGGGCGTCAGCGTATTCCTCTTGGTTCTTGGAATTGTCATATCCTCCTTATGTTGGGTAGGGAGGAAAAGAAGGCTCGTAAACATCAGAAGGAAGTTCTTCGAGAAAAACGGGGGTCTCATGCTTCAGGAACAACTTTCCGAGCAACATGGTTACAGTGAAATGGCGAAGCTATTTACCGAAGAGGAGCTCAAAGAAGCCACAGATAACTTCCATGAAAGCAAAATTCTTGGGCGTGGAGGCCAAGGAACAGTTTACAAAGGAATATTACCAGATAAAAGAGTGGTTGCCATCAAGAAGTCCAGAATAGCAGAGCAAAGCCAAATCAAAGATTTCATCAACGAAGTGCTTGTACTCTCACAAATCAACCACAGGAACGTGGTCAAACTTCTGGGTTGTTGTTTGGAAACTGAAGTTCCTCTGCTAGTTTATGAGTTTGTCGCTAACAATACTCTGCTCCACCATATAGACCCATCAACGAAAACATCATGTCTTCCATGGGAAACTCGGCTAAGGATAGCTACTGAAACTGCTGGAGCCATATCTTACCTTCATTCTGCAGCTTCCATTCCAATCATTCACAGGGATATAAAGTCTACTAACATACTCTTGGATCACAATTACACAGCAAAGGTATCTGATTTTGGAGCCTCCAGGTTGGTTCCTTTGGACCAGACTGAAATCACTACACTTGTGCAAGGGACATTGGGATATTTGGACCCGGAGTACATACAAACCGGCCAGTTAACCGGGAAAAGCGATGTTTATAGCTTCGGGGTGGTGCTTATGGAGTTGCTGACTGGAAAGAAGGTGATTGAAATGAACAGGCCAGAAGAAGACAGAAATTTAGCTGTTCATTTTGTTTCTTCAATGAAGAAAGACCGTTTGCTTGAGATTCTAGATAGTGGAGTGTTGGATGAGAAAAATGTAGGGCAACTTAAGAAAGTTGCTGTATTGGCGAGTAGATGTATAAGAGTAAGTGGGCAAGACAGGCCAACCATGAAGGAAGTATCCATTGAGCTGGAAGGCCTGATAGCTATTGAAAAGCATCCGTGGGATGGAAAATATTTAAATTCCGAGGAAACTGAATACTTGCTTGCTCCAATATATGGAATTGAAGGCAGTACTAGCAATTCCACGGGGTTCGAAAGCATTGCACCTAAGATGGAAAGTGGGCGCTGA 2205 0.4576 MKLSRVITLSLFIAAAAVTSVAGQAKPGCSGACGHLDIPYPFGSREGCYRDENFLISCDTSSAKPIANYSNSNIQVLHVSLDGQLRLSGWVGWDCYVPSARWNFISFKLRRFAISNTKNKFTVIGCDTRAFVYDFWGRRFSTGCTSFCRDVADLVNGSCSGIGCCQTSFPTGNLGYNISIFSYRNHSQVLDFNPCSYAFVVEDGAFNFSSLDLLDLRGKRDFPMIIDWAIWGENCSEAVKNRSSYACMDNSFCVDSQNVRGYLCRCNEGFRGNPYLSGSDGCRDIDACSNSTLNLCSQTCHNLYGTYNCSCLPGYIGNGFKNGTGCLLVDKSNNVPITEVALGVSVFLLVLGIVISSLCWVGRKRRLVNIRRKFFEKNGGLMLQEQLSEQHGYSEMAKLFTEEELKEATDNFHESKILGRGGQGTVYKGILPDKRVVAIKKSRIAEQSQIKDFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFVANNTLLHHIDPSTKTSCLPWETRLRIATETAGAISYLHSAASIPIIHRDIKSTNILLDHNYTAKVSDFGASRLVPLDQTEITTLVQGTLGYLDPEYIQTGQLTGKSDVYSFGVVLMELLTGKKVIEMNRPEEDRNLAVHFVSSMKKDRLLEILDSGVLDEKNVGQLKKVAVLASRCIRVSGQDRPTMKEVSIELEGLIAIEKHPWDGKYLNSEETEYLLAPIYGIEGSTSNSTGFESIAPKMESGR 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4432g00002 734 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Pral4432g00002 734 SMART serkin_6 412 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4432g00002 734 SUPERFAMILY EGF/Laminin 284 319 - -
Pral4432g00002 734 Gene3D Phosphorylase Kinase; domain 1 378 487 - -
Pral4432g00002 734 SMART egfca_6 284 327 IPR001881 GO:0005509
Pral4432g00002 734 FunFam Wall-associated receptor kinase 2 382 487 - -
Pral4432g00002 734 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 17 685 IPR045274 GO:0007166
Pral4432g00002 734 Gene3D Laminin 234 319 - -
Pral4432g00002 734 Gene3D Transferase(Phosphotransferase) domain 1 488 697 - -
Pral4432g00002 734 SUPERFAMILY Protein kinase-like (PK-like) 392 680 IPR011009 -
Pral4432g00002 734 SMART egf_5 287 327 IPR000742 -
Pral4432g00002 734 SMART egf_5 234 283 IPR000742 -
Pral4432g00002 734 CDD STKc_IRAK 418 685 - -
Pral4432g00002 734 Pfam Protein kinase domain 412 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4432g00002 734 Pfam Wall-associated receptor kinase galacturonan-binding 29 85 IPR025287 GO:0030247
Pral4432g00002 734 ProSiteProfiles Protein kinase domain profile. 412 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4432g00002 734 FunFam Wall-associated receptor kinase 2 233 286 - -
Pral4432g00002 734 ProSiteProfiles EGF-like domain profile. 284 321 IPR000742 -
Pral4432g00002 734 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 300 311 IPR000152 -
Pral4432g00002 734 CDD EGF_CA 284 317 - -
Pral4432g00002 734 FunFam Wall-associated receptor kinase 2 488 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4432g00002 Pral-Chr4432 19306 22128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4432g00002 1 734 Receptor kinase-like Gene Family AT1G21230 47.145 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Pral4432g00002 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4432g00002 - - qsa:O6P43_036024 927.546