Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4430g00059 ATGGGCTCGTGTGGGAAATCAAGTATATTAGACGACGCCTCAAGCGGGTCTGTCATTGAGCAGCACTCACGCGCAGAGTTTCCATTGCAGTCTATTCCTGTGCAGCGGTCCTGTCCATTAGTAACTTGCAATGCATTGGACACTAATGTGGAGCACTCCAATATGATGGAGGGACGTATGATTTCGTCTAGAGAGGTCCACACTGGGTGTGCCAGCTCCATTGTTGCTCCAGAGATGTCCAGAGATTCATGGTTGATGGCGAAGGAAAATGACAATACTGATAGGTTACAATGCTCAGGTACAGTAGTAAGTTGCAATGCGGTAGACTCTAATGTTAAGCGCTCCAATATGATAGAAGGTTGTATGAATTCGTCTGGAGAGGTCCACACTGGGTCTTCAAGTTCCACTGATGTTCCACAGATATCCGGAGATTCATTGTTGATGGAGAACAAAAGTGAAAATACGGTTAGTTTACAGCGGTACTGTCCAGTGGTTACTAGCAATGTGTCGGACTCTAATGCTGAGCACTCCAATATGATCGAAGGTTCTGTGGATTCATCTAGAGAGGTCCACACAGGGTCTGCAAGCCCTGTTGATGCTACAGAGGTGCCCAAAGATTCATTGTTGATGGTGAATAAAAATGGAATTACTGATATTTCACAACAGTCCTGCCCAGTAGTAACTTCCAATGTGTTGGACTCTAATGTTGGTTGCTCCAATATGATGGAAGGTTGTATGAATTTGTCTAGAGAGGTCCACACTGGGTCTGCAGTTTCCATTGATGTTCAAGATATGTCCAGAGATTCACTGTTGACGGTGAACAAAAATGAAAATACCGGTACACGTTCAGTTGTAGCTTCCAATGTGTCGGACTCTGATGTTGAGTGCTCCAATATGGCGGAAGGTTATATGAATTCATCTAGAGAGGTCCACTCTGGGTCTGCAAGTCCCATCAATGCTTTGGAGATGCCCAGAAATTCATTGTTGGAGAACAAAAGTGGAAATACTGATATTTTACAACAGTCCTGTCTAGTAGTGACTTGCAATGCGTTGGACTCTAATGTTGAGCACCCCAACCTGTTGGAAGGTTGTATACATTCAACCAGAGAGATGGGAGGCTCCATTGATGCTCCAGAGGCAATCAGAGATTCATTGCTGATGGAGAACAAAAGTGAAAATACTGATCTATTACAACAGTCCTGTCTAGCAGTAACTTGCAATGCGTTGGACTCTAATGTTGAGCGCTCTAACATGATGGAAGGTTGTATGAATTCATCTAGAGAGGTCCATACAGGACCTGCAAGTCCTATTGATGTTCTAGAGAGGTCTGAAGATTCTTTGTTGATGGTGAATAAAAGTGAAAATACTGAGATGTCACTTCTGGAGAAAACCTCAGAGAATGAAAGCCAGACTTGTCCAAGTATATTTTGTGCGCAAATTAAACTTTCTAATCTAGAAAATGTCAGGTTGGTCTCGGAAGGAAAACCTCATGCCAAAGATGGCCTCAAAATGCCATCAGACTTCATATTGACTAGTGGTTCACCTAAGGATTGTGTTCATCAGGATGGGCACAAGGATGAGAAGAGCAACATATTCCACTCTGAAGGTGAAAAAGATGCTGGTTTACCAACTGGCTTCCTGGTTTATTACGACCAACAAAGCGAACAAGAGGACCCTATGAGAAATGCTAATCAATTGTTGGAGGGTGTCAACGAAGGTGATTTGATTTGTGGGATTGAAGCTGATGCCTACAAGCAGACTCATTCACAGGGCAGTGAAGTACCCACAGATGTAATATATACTGAAGCAGAGGCCACAAGTGATCAGAAAGATGGTGACGATGAAAATAGTCCTGATGAAGACTTTGTTGATAAAGAAAGTATCATTAATACACATGTCCAAGTATTCTCCTCACCAGGCCATGAAAGGATCCTGGGGAGTTTGCCTGTAACTTGTTCATCTAGCGAGGCTATCCACTCAGATAAGGAGAAGGGGATTGATGATATCGATACTGATTTTGATGCAGAAGGTGTTGTGAAAGTTAAGGAAAAAAATAATGATGTTAGTACTGAAATAAATGTTGAAATGAAGAACAATATGCCAAAAGATGATAATGCATGCAAGTTTAATGACAGTTCCTCAAAAACTCATGCCAACTGTACCTTGAGAAAAACGTTTCCTCCTGAATCAGATCTTCCTTCTGTTGACTATATCAGTATTAGCTCTCCAAGGGACGTGCCTGATCTTCTCAAGGAGGTAAATGGTTCCATCAGTTATAATAGCCTTGTGGGCGATTCTGGGGAGGCAGACTGTATTAGGAAAGATATTATACAAGTTGATTATATCTCTGAAGGCAATTATTCTGGGAATGCGTCCTTGCCTATTCGAAGGAATAGTCGAAGAAGTAAATCTAGTCATAAGACACAGACCAAAAGGGCTTCGAGGAAATGCAAGAACAAAACCAGTGTGCCACTCCTAGGTGGGGATATGAAGATGATCCTGGAGGCTGCTAGAAGGAAAAGAAGCTGTTTCTCTAAACCAGCTCGTTCTTCTATCTGGGGATTGGTAGGAAACATTAATAAGTTTTTTGAACAAGATAATGATATTGGAGTTGATCAGGTTATGTGTCAAGGATTGGGGAAGGTGAGAGGTGCCCGTAAAAGTGGCACAAGGAACAAGAAGGGTGCAATTTCTAGCTCACTGAGTTCAACGAAGAAATGCTGTGCTTCAACGACTCGTGTTCGCTTGAAGATTAAACTGGGGAAAGAAGTTCATTTAAGTTGTTCAGATGTCTTGGTTCCAGATGTTATGAACGGTTCATGTTCTGCTTCTAATGCGGGGCCTGGTCCAGGCTCTCAGGAAAGAAACAGCAATGCTGGCAATAAATGTTCAGAAGCGGTTGAAGTAGGCAAGTCTGAATCTTTAACAAACAGCCTGGATGAGGATGCCCTTGTTCTGAATGGACAAATGGCAAATCATCACTTTGAAGCTGCTGCAACAGAAGACAAGTCAGATGAGGTCACCGAGCAAGTATTGCATATGATCTCTCCAGAGAGCATGATTGAACCGCTGAGAGAGACACGTAATGATAAGGGGATGGATCCTGGAACTTCGCCTGATTCAGAAGTTATCAATTCAGTTCCTGAAGTCCAGGGTGGAGAAAGACATCAACAAGGTTTGCACGATTCTATTCTTGGTTCTTCTATAGTGTCTGCTGGTGGGAGAAGGAAGAAGCAAGACAAACTTACTTCTTCAAGTAGTTCTGTTGTTGAAGATGGCTCACAAGGGCCACCAAGGAAAAATAAATCCAAGCACTCAAAGAATCGTGGACGTAAAAAGAATCCCAATGATGTTGTTTGCTCCATGAGTTTGCATACTTCCACTAGTATAAATGCCGTGAGCTACTCAGTAAGCCATAAAGAATTATCCAGTGAATCATTGCCCCCATCTGGAGAGATTGAACTTGAAGACTCCGCTGAGGCTTTGAAAGTAAAAAATGACATGAAAGTTGAGACTACTTGCAGCCCAAATGACAATTATGAGCTTTCAGCAAGATCCTCAGGTCGTAAACTTCCTAAAAGTCTTACATCTTGTAAAATCATCACTCCCAAATCAAAAGCTTCTAACTCAATGAGCCGGAAAAAGACTGGTAGCAGACGTAGGGAGAAACAACTGAAACCTATTGAGAAGAGTGAAGTCAAGGGAAAAGCTGTTTCTGAAAAGGTTATCTCTGAAGCAGAAGATTGTGCAGGACATGTTGATGGAAGTGGTAGATTGGATGATGTTGGAAAAACTAATGCCGGTGACAACAAAGTATCAGTAAATGGATCCAATTTGGACACAATAGTTAGTACTGGTTTGGGGGAGCAGCATCCATCACTTCATAATGCATGGGTGCGCTGTGATGATTGTCACAAGTGGCGGCGTATTCCTGTTGAGCTTGCAGATCTAATTGAAGAAAAACAGTGCACCTGGACCTGTAAGGATAGCAATGATAAAGCCTTTTCTGATTGCTCTATACCCCAAGAAAAGTCAAATGCAGAGATCAACGCAGAGTTGGGATTATCAGATGCATCAGGAGAAGAAGATGCTTATGAAGGCCGTAAAAAGGATAAGAAGTTGGAATATCATCACCCAACAGTTCACCAGGAGTCAACTTTTACCCATGTTCTTACTAATGAGTTTCTGCACCGCAGCCGCAAAACTCAGACTATTGATGAGATAATGGTTTGCCATTGTAAACCACCATCAGAAGGTAGGTTTGGTTGTGGGGATGAATGTCTAAATCGGATGCTCAACATTGAATGTGTTCAAGGAACCTGTCCATGCGGGGATCTTTGTTCAAATCAACAGTTCCAGCAACGCAAGTATGCCAGCTTGACGTGGTTCAAATGTGGGAAAAAAGGTTACGGGTTGAGGGCTGTTGATGATATATCTAAAGGGAAGTTTCTTATTGAATATGTTGGGGAGGTGCTTGATATGCATGCTTATGAGGCACGGCAAAGAGAGTATGCTTTCAAGGGTCATCGGCATTTCTACTTCATGACCTTGAATGGCAGCGAGGTGATAGATGCAAGTGCAAAAGGAAACCTGGGACGTTTCATTAATCACAGTTGTGATCCTAATTGCCGAACAGAAAAGTGGATGGTGAATGGCGAAATCTGTATTGGACTTTTTGCATTGAGGGATATAAAGCAGGGTGAAGAGGTGACATTTGATTACAACTATGTAAGGGTCTTTGGTGCTGCTGCCAAAAAATGTTATTGTAGTTCACCTCTATGTCGTGGTTATATAGGTGGTGGTGATCCACTTAATGCTGAAGTCATTGTTCAAGGTGATTCAGATGAAGAATTTCCAGAACCAGTGATGCTTACCGAAGGTGGTGAAATTGAAGGCAGTATACCTAGATCTGATGTTATGCATGCTGAAAGGAATTTGTCAAAAGACAGAGATCTAGTTGACAAGTCTAGAAGTGCTCAAGTGCCAGGCAATAATCAGGAGGAGAATTCTGTAATCCCATCTCCTGCTATTTCCCTGTTGCACTGCCCATTAGATGGGGAAGATTCAATGGGCAAATTGCCATCATCTGACATGGAAGAAATTTCTCAACAAATGGAGGATGTGATTAGTAAATCCATGCCTGCTGTACAACCACGGTATTTGTTGAAACCAGAGCTTCCTGACAATATTTCTTCCAGCCAAAGAATGGAGGCTTCTGCTACACCTATTAGTAAAATGATGTCAAATTTTATTAAGAATAAAAGAGAATCCAAGTCTGAAATAGTTGAGGACAGGCCTGGTTTTCCAAAAACACATATGCTTGTGAAGACCTCTCGAGCAAACAGTTCAGTTAAAAAGGGAAAGGTTCATGCTAATCATTCAAATGGCCTCAAAGCTGCAGTGGCAGCCAACAGATTGCAGGTAGCATCAATCAAACCTAAAAAGGTGGTGGAAGGTTCTTCCAATGGCCGTTTTGAAGCAGTTCAGGAGAAACTTAAGGAGTTGTTAGATGAGGATGGAGAAGGAGGAATAAGCAAAAGAAAAGATGCAACCAAAGGCTACTTAAAGCTGCTGCTTCTCACTGTGGCATCAGATGATAGGAATAATGGCGAAGCAATTCAAAGCAATCGAGATCTTTCCATGATCCTTGGTGCCCTTCTGAAAACAAAATCTAGAGCAGTGCTGAATGATATAATTAACAAGAATGGTCTGCAGATGTTGCATAACATTATGAAACAGTACAGACGGGATTTCAAGAAAACTCCCATACTACGGAAGCTTCTCAAGGTCTTGGAGTATCTAGCAGCAAGCAAGATTTTGACATACGACCACATTAATAGCGGCCCCCCCTGTCATGGAATGGAGAGCCTTAGGGAGTCCATGTTGTCTCTGACAGAGCATGATGACAAACAGGTCCATCAAATTGCTCGAAGCTTTCGGGACAGATGGATTCGCAGACCTTTCAAAAGACATGGTTATGTGGACCGAGATGATTTCAAGGGAGAATCTCATAGGAATTTTAACTGCAATAGATTTTCAGCACCACAGAACCATAGGCGGGAGCTCGATGTGAGACCTAACGAAGCAACAGATTGTGCCCAGCAATCAAAACTTGTGACAACTTCAGTAGATGTTGGTTCCCAGGAAGGCTGCTCTGCAGTGTCTTTAGATGGGTGTAAAGTTGATGGGACGAAAAGGCGCAAGCGTAAAAGCAGATGGGATCAACCTGCAGAGACAATTTCAAATTTATCATCTAGTCCATGTAAGAAACAAAATGTCGATTCTGGGCTATCAATGCGTGCTGATGCAGCTATTGACTCTTTTGATGGAAGTCAGAACATTACTGAGGATTTCCCCCCAGGTTTTTCCTGTCCTGTTCAACCGCAATTGGATTCTTCGAATGCTTCACCTCACCCTGTTGATCTTGCTTCGCAAAGTGTGGGCAATTCTGGGTGCCCCCCAGATACAGTAATTGGACATCTAAAGGAGAAATTTAATTCTCGCATGCCTGTCTCATATGGAATGCCATTATCTTTTGTCCAACAGTTTGGCACACCTCGTACTGAAATATCAGGGAGTTGGGTCATTGCGCCGGGTGTGCCTTTCAGCCCATTTCCTCCATTGCCCCCCTATCCACGGGATAATAATGACTGTCGACCTTCTGGTTCTACTAATTCTGCAGCTGTAGATCAGCCTATTGAAGTTCAGCAACGGGATATGAGTGGCCCAGTTGGTTGTTACCCTGATGATATTACTCCCAGCACCACTGATACTAGCACTAAAGACGTTGACCTTCCACATGAAGATGATAAACAACCTTATAAACGTTTGAAAGATTCCTCTTGTGATTTGGGAAGGAAGTACTTTAGACAGCAAAAATGGAATAATTCAAAAATACATCGACCCTGGTTCAGGAGGAATGCGTGGGGGTCTAATGGGAACTACACTGCTGGAGGTGTATGCAGTGTAAGCGTAGGAGATGGACCAAGTGAGTCAAAAGTTGCATATTCTTCGGAGGATGTAATCTGTAGAGCGGAGGAAGGTGACAATAATGATGTTTAA 7062 0.4264 MGSCGKSSILDDASSGSVIEQHSRAEFPLQSIPVQRSCPLVTCNALDTNVEHSNMMEGRMISSREVHTGCASSIVAPEMSRDSWLMAKENDNTDRLQCSGTVVSCNAVDSNVKRSNMIEGCMNSSGEVHTGSSSSTDVPQISGDSLLMENKSENTVSLQRYCPVVTSNVSDSNAEHSNMIEGSVDSSREVHTGSASPVDATEVPKDSLLMVNKNGITDISQQSCPVVTSNVLDSNVGCSNMMEGCMNLSREVHTGSAVSIDVQDMSRDSLLTVNKNENTGTRSVVASNVSDSDVECSNMAEGYMNSSREVHSGSASPINALEMPRNSLLENKSGNTDILQQSCLVVTCNALDSNVEHPNLLEGCIHSTREMGGSIDAPEAIRDSLLMENKSENTDLLQQSCLAVTCNALDSNVERSNMMEGCMNSSREVHTGPASPIDVLERSEDSLLMVNKSENTEMSLLEKTSENESQTCPSIFCAQIKLSNLENVRLVSEGKPHAKDGLKMPSDFILTSGSPKDCVHQDGHKDEKSNIFHSEGEKDAGLPTGFLVYYDQQSEQEDPMRNANQLLEGVNEGDLICGIEADAYKQTHSQGSEVPTDVIYTEAEATSDQKDGDDENSPDEDFVDKESIINTHVQVFSSPGHERILGSLPVTCSSSEAIHSDKEKGIDDIDTDFDAEGVVKVKEKNNDVSTEINVEMKNNMPKDDNACKFNDSSSKTHANCTLRKTFPPESDLPSVDYISISSPRDVPDLLKEVNGSISYNSLVGDSGEADCIRKDIIQVDYISEGNYSGNASLPIRRNSRRSKSSHKTQTKRASRKCKNKTSVPLLGGDMKMILEAARRKRSCFSKPARSSIWGLVGNINKFFEQDNDIGVDQVMCQGLGKVRGARKSGTRNKKGAISSSLSSTKKCCASTTRVRLKIKLGKEVHLSCSDVLVPDVMNGSCSASNAGPGPGSQERNSNAGNKCSEAVEVGKSESLTNSLDEDALVLNGQMANHHFEAAATEDKSDEVTEQVLHMISPESMIEPLRETRNDKGMDPGTSPDSEVINSVPEVQGGERHQQGLHDSILGSSIVSAGGRRKKQDKLTSSSSSVVEDGSQGPPRKNKSKHSKNRGRKKNPNDVVCSMSLHTSTSINAVSYSVSHKELSSESLPPSGEIELEDSAEALKVKNDMKVETTCSPNDNYELSARSSGRKLPKSLTSCKIITPKSKASNSMSRKKTGSRRREKQLKPIEKSEVKGKAVSEKVISEAEDCAGHVDGSGRLDDVGKTNAGDNKVSVNGSNLDTIVSTGLGEQHPSLHNAWVRCDDCHKWRRIPVELADLIEEKQCTWTCKDSNDKAFSDCSIPQEKSNAEINAELGLSDASGEEDAYEGRKKDKKLEYHHPTVHQESTFTHVLTNEFLHRSRKTQTIDEIMVCHCKPPSEGRFGCGDECLNRMLNIECVQGTCPCGDLCSNQQFQQRKYASLTWFKCGKKGYGLRAVDDISKGKFLIEYVGEVLDMHAYEARQREYAFKGHRHFYFMTLNGSEVIDASAKGNLGRFINHSCDPNCRTEKWMVNGEICIGLFALRDIKQGEEVTFDYNYVRVFGAAAKKCYCSSPLCRGYIGGGDPLNAEVIVQGDSDEEFPEPVMLTEGGEIEGSIPRSDVMHAERNLSKDRDLVDKSRSAQVPGNNQEENSVIPSPAISLLHCPLDGEDSMGKLPSSDMEEISQQMEDVISKSMPAVQPRYLLKPELPDNISSSQRMEASATPISKMMSNFIKNKRESKSEIVEDRPGFPKTHMLVKTSRANSSVKKGKVHANHSNGLKAAVAANRLQVASIKPKKVVEGSSNGRFEAVQEKLKELLDEDGEGGISKRKDATKGYLKLLLLTVASDDRNNGEAIQSNRDLSMILGALLKTKSRAVLNDIINKNGLQMLHNIMKQYRRDFKKTPILRKLLKVLEYLAASKILTYDHINSGPPCHGMESLRESMLSLTEHDDKQVHQIARSFRDRWIRRPFKRHGYVDRDDFKGESHRNFNCNRFSAPQNHRRELDVRPNEATDCAQQSKLVTTSVDVGSQEGCSAVSLDGCKVDGTKRRKRKSRWDQPAETISNLSSSPCKKQNVDSGLSMRADAAIDSFDGSQNITEDFPPGFSCPVQPQLDSSNASPHPVDLASQSVGNSGCPPDTVIGHLKEKFNSRMPVSYGMPLSFVQQFGTPRTEISGSWVIAPGVPFSPFPPLPPYPRDNNDCRPSGSTNSAAVDQPIEVQQRDMSGPVGCYPDDITPSTTDTSTKDVDLPHEDDKQPYKRLKDSSCDLGRKYFRQQKWNNSKIHRPWFRRNAWGSNGNYTAGGVCSVSVGDGPSESKVAYSSEDVICRAEEGDNNDV 2353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4430g00059 2353 MobiDBLite consensus disorder prediction 1014 1045 - -
Pral4430g00059 2353 MobiDBLite consensus disorder prediction 1071 1119 - -
Pral4430g00059 2353 MobiDBLite consensus disorder prediction 2206 2277 - -
Pral4430g00059 2353 ProSiteProfiles Zinc finger CW-type profile. 1292 1346 IPR011124 GO:0008270
Pral4430g00059 2353 SUPERFAMILY SET domain 1389 1596 IPR046341 -
Pral4430g00059 2353 ProSiteProfiles AWS domain profile. 1406 1456 IPR006560 GO:0005634|GO:0042054
Pral4430g00059 2353 Pfam AWS domain 1421 1455 IPR006560 GO:0005634|GO:0042054
Pral4430g00059 2353 Gene3D SET domain 1355 1607 IPR046341 -
Pral4430g00059 2353 MobiDBLite consensus disorder prediction 2076 2093 - -
Pral4430g00059 2353 FunFam Histone-lysine N-methyltransferase 1357 1614 - -
Pral4430g00059 2353 SMART set_7 1458 1581 IPR001214 GO:0005515
Pral4430g00059 2353 MobiDBLite consensus disorder prediction 1649 1671 - -
Pral4430g00059 2353 MobiDBLite consensus disorder prediction 799 818 - -
Pral4430g00059 2353 MobiDBLite consensus disorder prediction 2217 2232 - -
Pral4430g00059 2353 SMART shorttest3 1406 1457 IPR006560 GO:0005634|GO:0042054
Pral4430g00059 2353 MobiDBLite consensus disorder prediction 2064 2095 - -
Pral4430g00059 2353 MobiDBLite consensus disorder prediction 2261 2277 - -
Pral4430g00059 2353 MobiDBLite consensus disorder prediction 790 819 - -
Pral4430g00059 2353 MobiDBLite consensus disorder prediction 2110 2155 - -
Pral4430g00059 2353 PANTHER SET DOMAIN PROTEINS 814 2079 - -
Pral4430g00059 2353 Pfam SET domain 1469 1575 IPR001214 GO:0005515
Pral4430g00059 2353 Pfam CW-type Zinc Finger 1298 1344 IPR011124 GO:0008270
Pral4430g00059 2353 CDD SET_SETD2 1457 1599 IPR044437 GO:0010452|GO:0046975
Pral4430g00059 2353 MobiDBLite consensus disorder prediction 2126 2152 - -
Pral4430g00059 2353 MobiDBLite consensus disorder prediction 1203 1233 - -
Pral4430g00059 2353 ProSiteProfiles Post-SET domain profile. 1583 1599 IPR003616 -
Pral4430g00059 2353 Gene3D - 1295 1354 - -
Pral4430g00059 2353 ProSiteProfiles SET domain profile. 1450 1575 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4430g00059 Pral-Chr4430 342124 356311 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4430g00059 1441 1598 C2H2 Transcription Factor Family AT2G23740 33.702 4.83e-20 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4430g00059 SET 5.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4430g00059 - - pcin:129303139 3674.4