Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4430g00051 ATGTCAAACCAGAATCGTCGTCCCTCGTTTTCGTCCTCGACAACATCGTCGTTGGCGAAACGGCATGCGTCGTCGTCGTCGGAGATTGTGGGGAAGCTCACGGCCCTGCCTCCACACATGGCCAAGAAGCGAGCGCCTCTCGCTAACGTGACCAATCTAAAGAATGTGTCTCACACTGCTTCCCGGAACCCTCTCCCATCATCAACTCTGGTACCTGGTGCAACTAAAATCGCTAAGACAAACAGGGAATCCACCTCGTCAAATGTTAAATCAAGTGCAGTTGTTTTCCCCAAGGCTAGTCCATTTGCACAAAAAGATGAAGCTGCTCCTACAATTGCAGCTCTCACCGCTCCAGTTGCTGCCAATTTGGATGCAAAATCAAGTGCCACTGATTTTCCTAAGGTTGCTTCTTCTCTACAAAAATCTGAAGCCGCTCCCGCAGTTTGTAATTCCACCGTCCCTCTTACTAGCAGCATGGATGTTTCTCCTAGTAAATCAGATGGGATGTCAGTCTCTATGGATGAGACTATGTCTACTTGCGATTCTTTCAACAGTCCTGAAGTTGAATATATGGACAGCAACGATGTTTCCGCTGTTGACTCTATTGGTAGAAAGACATTGAGCATTCTGAACATTTCTGATAATACAGATGGAACAACAGGCAACATTTGTAACAGAGACATACTTGTTGAGTTGGAGAGAGAAGACAAAATTGCCAATATCGATAACAAATACATGGATCCACAGCTGTGTGCGACCTTCGCTTGTGACATCTACAAGCATCTGCGTGCATCTGAGGCAAAGAAAAGGCCTTCCGCAGATTACATGGAGAGAGTTCAAAAGGACATAAATCCCAGCATGCGTGCTATATTGATTGACTGGCTTGTTGAGGTGGCTGAAGAGTATCGACTCGTGCCTGATACATTGTATTTGACAGTGAACTACATAGATCGGTATCTTTCAGGGAATGCTATGAACAGGCAAAAACTTCAATTACTCGGAGTTTCCTGCATGATGATTGCCTCCAAGTATGAGGAGATTTGCGCGCCTCAGGTCGAAGAATTTTGTTACATAACTGATAACACATACTTCAAGGAGGAGGTTTTGCAGATGGAATCTGCGGTGTTGAATTTTCTGAAGTTCGAAATGACGGCCCCAACAATTAAATGTTTCTTGAGACGATTCGTTCGCGCAGCTCAGGGAGTGAATGAGGTCCCATCATTGCAATTAGAATGCTTGGCCAACTACATCGCCGAACTGTCTCTCTTGGAGTACAGCATGCTTTGCTATGCCCCTTCACTTACAGCTGCTTCTGCAATTTTCCTCGCCAAGTATCTACTCTTCCCTTCAACCAAGCCCTGGAACTCTACATTGCAACACTATACGCTTTACCAGCCTTGTGATTTGTGCGACTGCGTCAGGGATCTCCATCGTCTCTGTTGTAACACCCACAGTTCTAATTTACCCGCAATCCGAGAGAAATACAGTCAGCACAAGTACAAATACGTGGCTAAGAAGTACATTCGTCCGTCAATACCTCAAGAATTTTTCCAGAATTGA 1560 0.4532 MSNQNRRPSFSSSTTSSLAKRHASSSSEIVGKLTALPPHMAKKRAPLANVTNLKNVSHTASRNPLPSSTLVPGATKIAKTNRESTSSNVKSSAVVFPKASPFAQKDEAAPTIAALTAPVAANLDAKSSATDFPKVASSLQKSEAAPAVCNSTVPLTSSMDVSPSKSDGMSVSMDETMSTCDSFNSPEVEYMDSNDVSAVDSIGRKTLSILNISDNTDGTTGNICNRDILVELEREDKIANIDNKYMDPQLCATFACDIYKHLRASEAKKRPSADYMERVQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQKLQLLGVSCMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNFLKFEMTAPTIKCFLRRFVRAAQGVNEVPSLQLECLANYIAELSLLEYSMLCYAPSLTAASAIFLAKYLLFPSTKPWNSTLQHYTLYQPCDLCDCVRDLHRLCCNTHSSNLPAIREKYSQHKYKYVAKKYIRPSIPQEFFQN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4430g00051 519 ProSitePatterns Cyclins signature. 288 319 IPR006671 -
Pral4430g00051 519 Pfam Cyclin, C-terminal domain 386 505 IPR004367 -
Pral4430g00051 519 FunFam Mitotic cyclin 6 271 371 - -
Pral4430g00051 519 Pfam Cyclin, N-terminal domain 257 383 IPR006671 -
Pral4430g00051 519 SUPERFAMILY Cyclin-like 247 383 IPR036915 -
Pral4430g00051 519 MobiDBLite consensus disorder prediction 1 73 - -
Pral4430g00051 519 FunFam Cyclin A1 373 505 - -
Pral4430g00051 519 Gene3D - 271 384 - -
Pral4430g00051 519 CDD CYCLIN_AtCycA_like_rpt1 247 382 - -
Pral4430g00051 519 PANTHER CYCLINS 189 497 IPR039361 -
Pral4430g00051 519 SMART Cyclin_C_2 386 509 IPR004367 -
Pral4430g00051 519 MobiDBLite consensus disorder prediction 50 73 - -
Pral4430g00051 519 MobiDBLite consensus disorder prediction 1 31 - -
Pral4430g00051 519 MobiDBLite consensus disorder prediction 158 178 - -
Pral4430g00051 519 SUPERFAMILY Cyclin-like 386 508 IPR036915 -
Pral4430g00051 519 PIRSF Cyclin_A_B_D_E 2 186 IPR046965 GO:0016538|GO:0044772
Pral4430g00051 519 PIRSF Cyclin_A_B_D_E 80 515 IPR046965 GO:0016538|GO:0044772
Pral4430g00051 519 SMART cyclin_7 390 478 IPR013763 -
Pral4430g00051 519 SMART cyclin_7 293 377 IPR013763 -
Pral4430g00051 519 Gene3D - 257 505 - -
Pral4430g00051 519 CDD CYCLIN_AtCycA-like_rpt2 386 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4430g00051 Pral-Chr4430 306892 310498 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4430g00051 1 519 Core Cell Cycle Gene Families AT1G44110 60.687 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4430g00051 K06627 - qsu:112028095 717.613