Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4430g00050 ATGTCAAACCAGAATCGTCGTCCCTCGTTTTCGTCCTCGACAACATCGTCGTTGGCGAAACGGCATGCGTCGTCGTCGTCGGAGATTGTGGGGAAGCTCACGGCCCTGCCTCCACACATGGCCAAGAAGCGAGCGCCTCTCGCTAACGTGACCAATCTAAAGAATGTGTCTCACACTGCTTCCCGGAACCCTCTCCCATCATCAACTCTGGTACCTGGTGCAACTAAAATCGCTAAGACAAACAGGGAATCCACCTCGTCAAATGTTAAATCAAGTGCAGTTGTTTTCCCCAAGGCTAGTCCATTTGCACAAAAAGATGAAGCTGCTCCTACAATTGCAGCTCTCACCGCTCCAGTTGCTGCCAATTTGGATGCAAAATCAAGTGCCACTGATTTTCCTAAGGTTGCTTCTTCTCTACAAAAATCTGAAGCCGCTCCCGCAGTTTGTAATTCCACCGTCCCTCTTACTAGCAGCATGGATGTTTCTCCTAGTAAATCAGATGGGATGTCAGTCTCTATGGATGAGACTATGTCTACTTGCGATTCTTTCAACAGTCCTGAAGTTGAATATATGGACAGCAACGATGTTTCCGCTGTTGACTCTATTGGTAGAAAGACATTGAGCATTCTGAACATTTCTGATAATACAGATGGAACAACAGGCAACATTTGTAACAGAGACATACTTGTTGAGTTGGAGAGAGAAGACAAAATTGCCAATATCGATAACAAATACATGGATCCACAGCTGTGTGCGACCTTCGCTTGTGACATCTACAAGCATCTGCGTGCATCTGAGGCAAAGAAAAGGCCTTCCGCAGATTACATGGAGAGAGTTCAAAAGGACATAAATCCCAGCATGCGTGCTATATTGATTGACTGGCTTGTTGAGGTGGCTGAAGAGTATCGACTCGTGCCTGATACATTGTATTTGACAGTGAACTACATAGATCGGTATCTTTCAGGGAATGCTATGAACAGGCAAAAACTTCAATTACTCGGAGTTTCCTGCATGATGATTGCCTCCAAGTATGAGGAGATTTGCGCGCCTCAGGTCGAAGAATTTTGTTACATAACTGATAACACATACTTCAAGGAGGAGGTTTTGCAGATGGAATCTGCGGTGTTGAATTTTCTGAAGTTCGAAATGACGGCCCCAACAATTAAATGTTTCTTGAGACGATTCGTTCGCGCAGCTCAGGGAGTGAATGAGGTACAATGCTGCCTGTCTCTTAAAACATCTCAATTTCTTAGAATTACTAGCATTCTTATGATGGATTTTTTGTGGATTTCTCAGGTCCCATCATTGCAATTAGAATGCTTGGCCAACTACATCGCCGAACTGTCTCTCTTGGAGTACAGCATGCTTTGCTATGCCCCTTCACTTACAGCTGCTTCTGCAATTTTCCTCGCCAAGTATCTACTCTTCCCTTCAACCAAGCCCTGGAACTCTACATTGCAACACTATACGCTTTACCAGCCTTGTGATTTGTGCGACTGCGTCAGGGATCTCCATCGTCTCTGTTGTAACACCCACAGTTCTAATTTACCCGCAATCCGAGAGAAATACAGTCAGCACAAGTACAAATACGTGGCTAAGAAGTACATTCGTCCGTCAATACCTCAAGAATTTTTCCAGAATTGA 1644 0.4471 MSNQNRRPSFSSSTTSSLAKRHASSSSEIVGKLTALPPHMAKKRAPLANVTNLKNVSHTASRNPLPSSTLVPGATKIAKTNRESTSSNVKSSAVVFPKASPFAQKDEAAPTIAALTAPVAANLDAKSSATDFPKVASSLQKSEAAPAVCNSTVPLTSSMDVSPSKSDGMSVSMDETMSTCDSFNSPEVEYMDSNDVSAVDSIGRKTLSILNISDNTDGTTGNICNRDILVELEREDKIANIDNKYMDPQLCATFACDIYKHLRASEAKKRPSADYMERVQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMNRQKLQLLGVSCMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESAVLNFLKFEMTAPTIKCFLRRFVRAAQGVNEVQCCLSLKTSQFLRITSILMMDFLWISQVPSLQLECLANYIAELSLLEYSMLCYAPSLTAASAIFLAKYLLFPSTKPWNSTLQHYTLYQPCDLCDCVRDLHRLCCNTHSSNLPAIREKYSQHKYKYVAKKYIRPSIPQEFFQN 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4430g00050 547 CDD CYCLIN_AtCycA-like_rpt2 386 528 - -
Pral4430g00050 547 ProSitePatterns Cyclins signature. 288 319 IPR006671 -
Pral4430g00050 547 Pfam Cyclin, C-terminal domain 386 533 IPR004367 -
Pral4430g00050 547 Gene3D - 271 384 - -
Pral4430g00050 547 SUPERFAMILY Cyclin-like 387 537 IPR036915 -
Pral4430g00050 547 SMART Cyclin_C_2 386 537 IPR004367 -
Pral4430g00050 547 MobiDBLite consensus disorder prediction 1 73 - -
Pral4430g00050 547 FunFam Cyclin A1 420 533 - -
Pral4430g00050 547 PANTHER CYCLINS 192 525 IPR039361 -
Pral4430g00050 547 CDD CYCLIN_AtCycA_like_rpt1 247 382 - -
Pral4430g00050 547 MobiDBLite consensus disorder prediction 50 73 - -
Pral4430g00050 547 Pfam Cyclin, N-terminal domain 257 383 IPR006671 -
Pral4430g00050 547 SMART cyclin_7 293 377 IPR013763 -
Pral4430g00050 547 SMART cyclin_7 422 506 IPR013763 -
Pral4430g00050 547 MobiDBLite consensus disorder prediction 1 31 - -
Pral4430g00050 547 MobiDBLite consensus disorder prediction 158 178 - -
Pral4430g00050 547 SUPERFAMILY Cyclin-like 247 383 IPR036915 -
Pral4430g00050 547 Gene3D - 257 533 - -
Pral4430g00050 547 FunFam Mitotic cyclin 6 271 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4430g00050 Pral-Chr4430 306890 310498 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4430g00050 1 547 Core Cell Cycle Gene Families AT1G44110 57.609 0.0 549
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4430g00050 K06627 - qsu:112028095 702.59