Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4430g00039 ATGGCCGAGCGTGTGTCACTCACACTTTCACTGCCTTTACCATCTCCCCAGTCGCCCCCAAGAATGGCCGCTTTTTGTGGTGGCACCGCCGCTTCCTCTCGCTTTCTCTCCTCCGTATCCAGAGCCTCCCTCTCCCTCGCTGCTTCTTCTCCTTCACCTTCCCTCTTTTCTTCCTCATCCTCCCTCAATTGCCTCAGATCCTCACCTCGCATTTCCCATCTCTTCCTCCATCAGCGAAGAGCTGAGGTTCGTGTATCGAGCGGACGATACACCACAGCCTCTGCGCCCAAGTCGTTTGCATCTGATCCCGATCAACTGAAGAGCGCTAGAGAGGATATTAAGCAGATTCTCAGGACTAAGTTCTGCCATCCATTACTGATTCGCTTGGGATGGCATGATGCTGGTACTTACAATAAGGATATTGAGGAGTGGCCTCAGAGAGGTGGAGCTAATGGTAGCCTGAGATTTGACGTTGAGCTGAAACATGCAGCCAATGCTGGACTTGTAAATGCATTGAATCTTCTCAAGCCAGTCAAAGACAAGTACTCTGGTGTGACATATGCAGATTTATTTCAGTTGGCTAGTGCTACTGCTGTAGAGGAGGCTGGAGGCCCAAAAATCCCTATGAAGTATGGAAGAGTGGATGTCTCCGGTCCTCATGAATGTCCTGAAGAAGGGAGACTTCCTGATGCTGGTCCCCCTTCACCTGCTGACCATTTACGCCAAGTGTTCTACAGGATGGGGTTAAATGACAAGGAAATAGTTGCATTATCTGGTGCGCACACACTGGGGAGGTCTCGACCAGAACGTAGTGGGTGGGGCAAGCCTGAGACTAAGTATACGAAAGATGGACCGGGAGCCCCTGGTGGGCAATCTTGGACAGTGCAATGGTTGAAGTTTGATAACTCTTACTTCAAGGATATCAAAGAAAAAAAGGACGAGGATCTATTGGTCTTGCCGACCGATGCTGCTCTCTTTGAGGATCCGTCTTTCAAGGTCTATGCTGAAAAGTATGCTGCAGATCAGGAAGCATTCTTTAAAGATTATGCTGAAGCCCATGCCAAACTCAGTAACCTCGGAGCCAAATTTGATCCTCCGGAGGGCATTGTCATTGATGATGTATCTTCGAAGGCTAACAAGCTTGAAGCAGTCAAGTACTCGCCTGGGAAGGAGGAAAAGCAAGAGTCATGTTTTCTTGCGCTGACGTGGGGTATAATAATACAAAGAAACTGTCTGAGGTCATGA 1245 0.4892 MAERVSLTLSLPLPSPQSPPRMAAFCGGTAASSRFLSSVSRASLSLAASSPSPSLFSSSSSLNCLRSSPRISHLFLHQRRAEVRVSSGRYTTASAPKSFASDPDQLKSAREDIKQILRTKFCHPLLIRLGWHDAGTYNKDIEEWPQRGGANGSLRFDVELKHAANAGLVNALNLLKPVKDKYSGVTYADLFQLASATAVEEAGGPKIPMKYGRVDVSGPHECPEEGRLPDAGPPSPADHLRQVFYRMGLNDKEIVALSGAHTLGRSRPERSGWGKPETKYTKDGPGAPGGQSWTVQWLKFDNSYFKDIKEKKDEDLLVLPTDAALFEDPSFKVYAEKYAADQEAFFKDYAEAHAKLSNLGAKFDPPEGIVIDDVSSKAXNKLEAVKYSPGKEEKQESCFLALTWGIIIQRNCLRS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4430g00039 415 PRINTS Haem peroxidase superfamily signature 203 215 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4430g00039 415 PRINTS Haem peroxidase superfamily signature 253 268 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4430g00039 415 PRINTS Haem peroxidase superfamily signature 123 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4430g00039 415 PRINTS Haem peroxidase superfamily signature 185 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4430g00039 415 PRINTS Haem peroxidase superfamily signature 293 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4430g00039 415 MobiDBLite consensus disorder prediction 265 288 - -
Pral4430g00039 415 FunFam L-ascorbate peroxidase S chloroplastic/mitochondrial 109 233 - -
Pral4430g00039 415 PRINTS Plant ascorbate peroxidase signature 322 346 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral4430g00039 415 PRINTS Plant ascorbate peroxidase signature 203 215 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral4430g00039 415 PRINTS Plant ascorbate peroxidase signature 184 202 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral4430g00039 415 PRINTS Plant ascorbate peroxidase signature 102 122 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral4430g00039 415 PRINTS Plant ascorbate peroxidase signature 123 138 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pral4430g00039 415 ProSitePatterns Peroxidases proximal heme-ligand signature. 253 263 IPR019793 -
Pral4430g00039 415 SUPERFAMILY Heme-dependent peroxidases 102 362 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral4430g00039 415 Gene3D - 109 362 - -
Pral4430g00039 415 CDD ascorbate_peroxidase 94 364 - -
Pral4430g00039 415 MobiDBLite consensus disorder prediction 210 237 - -
Pral4430g00039 415 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 79 363 IPR044831 GO:0004601|GO:0034599
Pral4430g00039 415 FunFam L-ascorbate peroxidase T, chloroplastic 231 354 - -
Pral4430g00039 415 ProSiteProfiles Plant heme peroxidase family profile. 126 415 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4430g00039 415 Pfam Peroxidase 110 341 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4430g00039 415 Gene3D Peroxidase, domain 2 231 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4430g00039 Pral-Chr4430 241356 245883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4430g00039 185 362 Peroxidase AT4G17690 33.498 1.23e-17 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4430g00039 K00434 - gmx:100802238 610.527