Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4430g00015 ATGGAGAGATCTGAATGCCAGGAGTTTGGTCTAAAGAACTTGGCTGAATTGCTGAAATCACAAGGTAATAAGGCAATGCAATTGAAGAAATACCCTGATGCAATTGATTTGTATACTTGTGCAATTGCACTTTGTGAAGAGAATGCTGTTTACTACTGCAACAGGGCAGCTGCTTACACTCAGGTCCACAAATACACAGAAGCAATCCAAGACTGTCTTAAGTCTATTGAGATTGACCCGAACTATAGCAAGGCATACAGTCGACTGGGTTTAGCGTATTATGCTCAGGGAAACTACAGAGATGCCATTGATAAAGGGTTTAGGAAAGCCTTGCTGTTGGATCCAAGTAATGAGTCGATTAAAGAAAATATACGGGTTGCTGAGCAAAAATTGATAGAAGAGCAACATCGTGCAGATCACAGTCAGAATTCAAGATCATCTCAGGAGTCTCAGAACCAGTCCGCACGAGGGTCAAGAGGTAATGCAGCTCCATCACCATTTGACTCGATGCCTTTTAATGCCAACGATCTTGCAAGCATGTTTATGAACATAGCCGCAAACACTGCCAATGCGTATCAAGGACAGCATCCCCAGGAGCGGCAAGGAGAAGATAGCAGCACCAATTCATCTAATGAACCTGAAATAAGAATCGGGAGCAATATTAATTTAAACTTGAACCAAATGCCCGAAGATTTGACGGGCGCTTTCAGGTCTGTGATGGAAGTGTTATCTGGGGCAGCGCCTCCAGGCCGCGAGCAGCCACAAGATCACTCCAACGGAAGAACTGCGCCAAACTAG 798 0.4449 MERSECQEFGLKNLAELLKSQGNKAMQLKKYPDAIDLYTCAIALCEENAVYYCNRAAAYTQVHKYTEAIQDCLKSIEIDPNYSKAYSRLGLAYYAQGNYRDAIDKGFRKALLLDPSNESIKENIRVAEQKLIEEQHRADHSQNSRSSQESQNQSARGSRGNAAPSPFDSMPFNANDLASMFMNIAANTANAYQGQHPQERQGEDSSTNSSNEPEIRIGSNINLNLNQMPEDLTGAFRSVMEVLSGAAPPGREQPQDHSNGRTAPN 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4430g00015 265 Coils Coil 117 137 - -
Pral4430g00015 265 PANTHER LD24721P 9 253 IPR047150 -
Pral4430g00015 265 MobiDBLite consensus disorder prediction 192 222 - -
Pral4430g00015 265 ProSiteProfiles TPR repeat profile. 83 117 IPR019734 GO:0005515
Pral4430g00015 265 Gene3D Tetratricopeptide repeat domain 11 164 IPR011990 GO:0005515
Pral4430g00015 265 Pfam Tetratricopeptide repeat 84 117 IPR013105 -
Pral4430g00015 265 ProSiteProfiles TPR repeat profile. 49 82 IPR019734 GO:0005515
Pral4430g00015 265 SMART tpr_5 49 82 IPR019734 GO:0005515
Pral4430g00015 265 SMART tpr_5 15 48 IPR019734 GO:0005515
Pral4430g00015 265 SMART tpr_5 83 117 IPR019734 GO:0005515
Pral4430g00015 265 MobiDBLite consensus disorder prediction 241 265 - -
Pral4430g00015 265 MobiDBLite consensus disorder prediction 144 160 - -
Pral4430g00015 265 FunFam Tetratricopeptide repeat (TPR)-like superfamily protein 10 161 - -
Pral4430g00015 265 Pfam Tetratricopeptide repeat 49 82 IPR001440 GO:0005515
Pral4430g00015 265 SUPERFAMILY TPR-like 14 128 IPR011990 GO:0005515
Pral4430g00015 265 MobiDBLite consensus disorder prediction 135 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4430g00015 Pral-Chr4430 128386 134224 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4430g00015 14 111 U-box Gene Family AT3G07370 34.694 3.11e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4430g00015 K16365 - qsa:O6P43_019753 369.392