Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4430g00004 ATGGTGAAGAGAGAAGCCAAGATCCAGGAGGAAGCGTCGAGGGGGAAGCAGAGCGCATCATATGGGAAGAAGTACAAGGGAGTGAGAATGAGGAGCTGGGGATCATGGGTGTCCGAGATTAGAGCACCTAACCAGAAAACAAGAATATGGCTAGGCTCTTATTCAACTGCTGAGGCAGCAGCCAGAGCCTATGACGCTGCACTTCTCTGCCTGAAAGGCTCCTCTGCAAATCTCAATTTCCCTTCTTCTTCTTCTTCGCACTTCCATATTCCTCAAGACACTCTTCTGTCCCCTAAATCAATCCAAAGAGTAGCTGCAGCTGCTGCTAATGCTCGTGTTGATAATGCCACCACCCCACCTTCTCCTCCTCCTGCTTCAGCCTCTTCCTCATCAGTCTCGTCTTCATCAATGCTTTCCTCTTCCTCTGATCTGGTTGATGATGACGCTTCATTAGTCTCATCCTCTGAGGCCTTCTTTGGCTATGATCACCCCAATGAACCAATGGCTGCGATGGAACCTTGGTACGGCCTTGAAGGGCTACAATCCCCCAAATATGTGGATCAAATACTAAGGGGTGCTTCTTTTGACTTCTATTCACCCCAGCTGCTCGATGACCTGTACGACGAAACCAATATCAGTCTCTGGAGTTTCTGCTGA 657 0.4901 MVKREAKIQEEASRGKQSASYGKKYKGVRMRSWGSWVSEIRAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGSSANLNFPSSSSSHFHIPQDTLLSPKSIQRVAAAAANARVDNATTPPSPPPASASSSSVSSSSMLSSSSDLVDDDASLVSSSEAFFGYDHPNEPMAAMEPWYGLEGLQSPKYVDQILRGASFDFYSPQLLDDLYDETNISLWSFC 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4430g00004 218 MobiDBLite consensus disorder prediction 1 21 - -
Pral4430g00004 218 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Pral4430g00004 218 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Pral4430g00004 218 FunFam ethylene-responsive transcription factor ERF014-like 23 83 - -
Pral4430g00004 218 CDD AP2 23 81 IPR001471 GO:0003700|GO:0006355
Pral4430g00004 218 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Pral4430g00004 218 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Pral4430g00004 218 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 151 - -
Pral4430g00004 218 MobiDBLite consensus disorder prediction 127 141 - -
Pral4430g00004 218 MobiDBLite consensus disorder prediction 107 141 - -
Pral4430g00004 218 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Pral4430g00004 218 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Pral4430g00004 218 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4430g00004 Pral-Chr4430 31642 32958 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4430g00004 25 217 AP2-EREBP Transcription Factor Family AT1G21910 52.451 9.85e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4430g00004 AP2 4.3e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4430g00004 - - gmx:100813615 215.312