Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4429g00008 ATGGCCATGCCGGTTGACATGTATGCCATCCCTGAGTTCGACTTTTCCGACTACACCGCCGCTACTTCTTCCGACGAGGACTGTAATTACTGGAGCCACTGGTCACCCGTCGTCAACTGGGACGCCTTAACATGTGGGCCTGGCCATGAAGGCTTCCATGACCTCATGGAAACCATGATGGACGACGCAGCCGGGGCAATGAGCCCCGCAACGGATCCCAGTGTGGAAGAGGAAGGGTGCAGCAACTCTACTTCCACGACGGATGTAACCATGGCCGACGACGAAGTGAACGGCGGTCTGGAGGATTTCAAGGGCCTGAGACTGGTGCACCTCCTGATGGCGGCGGCCGAGGCTCTCACTGGAGTCAACAAGAGCCGTGATCTGGTCATGGTGATATTGGTTCGGCTCAAGGAGTTGGTGTCGCCGACCGACGGAACCAACATGGAGCGGCTGGCAGCGTATTTTACGGATGCCTTGAGGGGCTTAGTAGAAGGAGCGCACAGTACTAAGCATTGGAATTGGATCGCCAACAGTGGCGAAGAGAATCGTCACCAGACCGACATGCTGGCGGCCTTCCAGCTCCTTCAGGACATGTCACCGCACGTCAAGTTCGCCCACTTCACCGCCAATCAGGCCATCCTCGAGGCGGTGGCCCAGTACAGGCGGGTCCACATCGTCGACTATGACATCATGGAAGGGACGCAATGGGCCTCCTTGATGCAGGCACTGGCCTCCCGCAAGGACTCGCCACACATCAGGATCACGGCTATCTCCAGGACGGGAAGTGCGCGGAGATCAATCGCCACCATCCAGGAGACTGGCCGTCGTTTGACTGCCTTCGCCGCTTCCATTGGCCAACCGTTCTCGTTTCACCAATGCAGGCTCGACTCCGACGAAACCTTTCGTCCCTCAGCCGTGAAACTGGTTCGAGGGGAGGCGGTGGTCTTCAACTGCATGCTCCACCTGCCCCACCAGAGCTACCGGGCACCAGAATCGGTGGAGTCGTTTCTGAGGGGAGCGGCGGCATTGAAGGCGAGAGTGGTGACTTTGGTGGAAGAGGAGGGAGGGCCAACGGGGAAAGATGTGGGGTTCGTGGGGAGGTTCATGGACAGGCTGCACCACTATTCGGCGGTGTACGATTCGCTGGAGGCGGGGTTTCCGATGCAGGGTCGGGCGAGGGCGTTGGTAGAGCGGGTGTTCTTGGGGCCCCGAATAGCCGCGTCGTTGGCCCGAATATACAGAATGGGGGAATCGGAGGGAGGAGAGAGGGGGTCGTGGGGAGAGTGGATGGGTGAGGAAGGCTTGAGGGGAGTGGACATAAGCTTCGCGAATCACTGTCAGGCGAAGCTGCTGCTGGGGTTATTCAACGACGGGTATGGGGTGGAGGAGATGGGCAGTAAAAATAAGTTGGTTCTGAGTTGGAAATCAAGGCGCTTGCTTTCCGCTTCTGTTTGGACTCCATTTGTAAATTAA 1473 0.5811 MAMPVDMYAIPEFDFSDYTAATSSDEDCNYWSHWSPVVNWDALTCGPGHEGFHDLMETMMDDAAGAMSPATDPSVEEEGCSNSTSTTDVTMADDEVNGGLEDFKGLRLVHLLMAAAEALTGVNKSRDLVMVILVRLKELVSPTDGTNMERLAAYFTDALRGLVEGAHSTKHWNWIANSGEENRHQTDMLAAFQLLQDMSPHVKFAHFTANQAILEAVAQYRRVHIVDYDIMEGTQWASLMQALASRKDSPHIRITAISRTGSARRSIATIQETGRRLTAFAASIGQPFSFHQCRLDSDETFRPSAVKLVRGEAVVFNCMLHLPHQSYRAPESVESFLRGAAALKARVVTLVEEEGGPTGKDVGFVGRFMDRLHHYSAVYDSLEAGFPMQGRARALVERVFLGPRIAASLARIYRMGESEGGERGSWGEWMGEEGLRGVDISFANHCQAKLLLGLFNDGYGVEEMGSKNKLVLSWKSRRLLSASVWTPFVN 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4429g00008 490 MobiDBLite consensus disorder prediction 66 89 - -
Pral4429g00008 490 Pfam GRAS domain family 108 486 IPR005202 -
Pral4429g00008 490 ProSiteProfiles GRAS family profile. 99 486 IPR005202 -
Pral4429g00008 490 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 82 482 IPR005202 -
Pral4429g00008 490 MobiDBLite consensus disorder prediction 75 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4429g00008 Pral-Chr4429 37490 38962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4429g00008 94 487 GRAS Transcription Factor Family AT3G54220 35.644 4.70e-52 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral4429g00008 GRAS 2.2e-95 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4429g00008 - - mesc:110607142 633.639