Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4429g00003 ATGATGGAGTCTATCTTTTATTTCCCTCTCTTTTTTCTCTTCTTTTCTGCCATATCCGCTTACACTTTCTCGGAATCCATCCGCCCAAATTTCACTGCTTCATATCTTCAATTCATTGACGGCTCTGGCACCTTCTTGTCATCCCGTAATGGAACATTCGAGGCTGCTATATTCAATCCTGGAGATCAACAATCCAGATTCTACCTGTCCGTCATACATGTGCCATCCCACACAATCATTTGGTCGGCCAATTGTGATGCTCCCATCTCAAATTCTGGTACGATGTATCTGACTGTCAAAGGAATCACCGTTTTTGATCGTGATGGAAACCTCAAATGGTCAACCCCACCATTGGAATCACCAGTATCCGCATTAAAACTTACTGAAACGGGCAATCTCCTCTTACTTGATCGTTCCAATGGCTCTCTTTGGGAGAGTTTCCAGCACCCGACAGACACAATTGTCATTGGACAGCGCTTACCTGTTGGGACATGGCTGTCGAGTGCGACATCAGGGTCTGACTTGTCAACTGGGGATTACAACTTGAGTATCACTCCATCTGATGCAATACTTCAGTGGCATGGACAGACATACTGGAGGTTGTCGATGGCCACAAAAGCCTTTAAGAATTCAAATGATAGGGTGGAATATATGGCTATAAACAGAACAGCTCTTGATCTCCTTGGAAGTAACGGAACAGTGACTGTGTTTCGGGTGCTCTTGCCCACGGCTGATTTCAGAATTGCCAAATTGGCTGTTAATGGCCAGTTTACTGTCCAAAGCTTTTCCGGTACTGATTGGGTCCAGGAATTTGTGGGGCCAGACGATGGTTGTAAGACTCCATTTTTTTGTGGCAGATTAGGATTATGTACTTATGGCTCTGCGTCCTCTTCACCTACATGTTCTTGTCCCCCAAACTTCCATGCAGGCTCAAGGAATGCTCCGGGTTGTGTACCAAGCGATGGTTCTTATTCTTTGCCATCTGCGTGTAATTCATCTGTCTATGATGGTGCATCAAATTCTTCAGCTGTTTCGTATTTGAAACTCGGGGATGGTATGGAGTACTTTGGCAATACCTACTCTAACACCGTAATAGATGTAGTGAACTTAACTATTTGCCAAGACCTCTGTTCATGGAATTGTTCGTGCTTGGGATTTTTCTACGAAGATTCGTCTGGCTCCTGCTATATGCTTCAAAATGAGTTGGGTTCTATTATGTCGAGCAGTGGAGGTGCAAGTAACTCGCTGGGCTACATAAAAGTTATTGCTGCATCTGCTATTGATGAGCCTGCTTCTGAAGAAGAGGGGCTTCCTGTGGCTGCTCTGGTGCTAATACCTCTTGCTGGATTCATTATTGCTCTGGCTCTCGGTTTCCTCTGGCTTAGAAGATTTAGAATCTCCAAGGGAAAAGAGGTAATATTAGGCAAGTTCAAATCACATTCTTCAGAGGACTTGGAGGCCTTCTATATTCCAGGTTTACCTAAAAGGTATGATTATGGAGAACTTGTGGAGGCTACCGATAATTTTAAGACTTTAATCGGTTCAGGTGGATTTGGTGCGGTGTTCAAGGGACAACTGCCTGATAAGACCGTTGTGGCGGTAAAGAAAATAGTAAATATGGGAAATCAAGGGAAAAAGGATTTCTGCACTGAGATTGCAATTATTGGAAATATTCACCATGTTAATTTGGTCAAACTGAAAGGCTTTTGTGCTGAAGGAAGACAGCGTTTGTTGATTTATGAGTACATGAATCGTGGCTCCCTGGATCGCACCCTCTTTGGTGGTGGACCAGTCTTAGAATGGCAAGAGAGGTTCGACATAGCACTTGGAACAGCGCGTGGACTTGCCTACCTGCACGGCGGGTGTGAGCAGAAGATCATTCACTGTGATATCAAACCTGAGAATATTCTCCTGCACGACCACTTTCAGGCCAAGATATCTGATTTTGGACTCTCGAAACTCCTCAGCCCCGAGCAGTCTGGTTTATTCACAACAATGAGAGGCACGCGTGGTTATCTAGCTCCAGAGTGGCTTACTAACTCTGCAATCACAGAGAAGACTGATGTTTATAGTTTTGGAATGGTACTGCTTGAACTAGTGAGCGGAAGAAAAAATTGTTCTCCGGGGTCAGAAATCCCTAGCAAGGACGATAGTATGAGTGGCCATTCAGGGACGTCATCTAGGACAGGACTGGTTTATTTTCCACTACATGCCTTAGAGATGCATGAACAAGGTAGGCACCTTGAATTGGCCGACCCAAGACTAGAAGGGCGTGTTTCGAATGAGGAGGTGGAGAAACTAGTGCGTATAGCCTTGTGCTGTGTTCATGAAGAACCGTCGCTGAGGCCAAATATGGCTGCCATTGTTGGCATGTTGGAAGGTGGGACTCCACTGGCCCAGCCGAGGATTGAATCTTTGAATTTCTTGCGCTTTTATGGGCGTAGGTTTACGGAGGCTTCCGTGATAGCTGATAAACAAGCACAGAAACCTTCAACTACAACTAGTGGTTCTCAAACTGCTTTTTCTTACATTTCTTCACAAGATATCTCAGGACCTAGATAA 2562 0.4485 MMESIFYFPLFFLFFSAISAYTFSESIRPNFTASYLQFIDGSGTFLSSRNGTFEAAIFNPGDQQSRFYLSVIHVPSHTIIWSANCDAPISNSGTMYLTVKGITVFDRDGNLKWSTPPLESPVSALKLTETGNLLLLDRSNGSLWESFQHPTDTIVIGQRLPVGTWLSSATSGSDLSTGDYNLSITPSDAILQWHGQTYWRLSMATKAFKNSNDRVEYMAINRTALDLLGSNGTVTVFRVLLPTADFRIAKLAVNGQFTVQSFSGTDWVQEFVGPDDGCKTPFFCGRLGLCTYGSASSSPTCSCPPNFHAGSRNAPGCVPSDGSYSLPSACNSSVYDGASNSSAVSYLKLGDGMEYFGNTYSNTVIDVVNLTICQDLCSWNCSCLGFFYEDSSGSCYMLQNELGSIMSSSGGASNSLGYIKVIAASAIDEPASEEEGLPVAALVLIPLAGFIIALALGFLWLRRFRISKGKEVILGKFKSHSSEDLEAFYIPGLPKRYDYGELVEATDNFKTLIGSGGFGAVFKGQLPDKTVVAVKKIVNMGNQGKKDFCTEIAIIGNIHHVNLVKLKGFCAEGRQRLLIYEYMNRGSLDRTLFGGGPVLEWQERFDIALGTARGLAYLHGGCEQKIIHCDIKPENILLHDHFQAKISDFGLSKLLSPEQSGLFTTMRGTRGYLAPEWLTNSAITEKTDVYSFGMVLLELVSGRKNCSPGSEIPSKDDSMSGHSGTSSRTGLVYFPLHALEMHEQGRHLELADPRLEGRVSNEEVEKLVRIALCCVHEEPSLRPNMAAIVGMLEGGTPLAQPRIESLNFLRFYGRRFTEASVIADKQAQKPSTTTSGSQTAFSYISSQDISGPR 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4429g00003 853 PIRSF SRK 1 846 IPR024171 GO:0004674
Pral4429g00003 853 ProSiteProfiles Protein kinase domain profile. 507 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4429g00003 853 CDD B_lectin 39 150 IPR001480 -
Pral4429g00003 853 Pfam Protein kinase domain 510 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4429g00003 853 FunFam Serine/threonine-protein kinase 583 800 - -
Pral4429g00003 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 626 638 IPR008271 GO:0004672|GO:0006468
Pral4429g00003 853 SMART blect_4 37 150 IPR001480 -
Pral4429g00003 853 PANTHER OS07G0415500 PROTEIN 9 803 - -
Pral4429g00003 853 Pfam S-locus glycoprotein domain 242 308 IPR000858 GO:0048544
Pral4429g00003 853 MobiDBLite consensus disorder prediction 825 853 - -
Pral4429g00003 853 Gene3D - 39 149 IPR036426 -
Pral4429g00003 853 CDD STKc_IRAK 513 794 - -
Pral4429g00003 853 CDD PAN_AP_plant 339 421 - -
Pral4429g00003 853 FunFam serine/threonine-protein kinase PBS1-like 476 582 - -
Pral4429g00003 853 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 201 IPR036426 -
Pral4429g00003 853 SMART ntp_6 341 418 IPR003609 -
Pral4429g00003 853 MobiDBLite consensus disorder prediction 705 726 - -
Pral4429g00003 853 ProSiteProfiles PAN/Apple domain profile. 330 423 IPR003609 -
Pral4429g00003 853 Pfam D-mannose binding lectin 78 161 IPR001480 -
Pral4429g00003 853 SMART serkin_6 507 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4429g00003 853 Gene3D Transferase(Phosphotransferase) domain 1 583 800 - -
Pral4429g00003 853 SUPERFAMILY Protein kinase-like (PK-like) 485 792 IPR011009 -
Pral4429g00003 853 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 43 148 - -
Pral4429g00003 853 ProSiteProfiles Bulb-type lectin domain profile. 30 148 IPR001480 -
Pral4429g00003 853 ProSitePatterns Protein kinases ATP-binding region signature. 513 536 IPR017441 GO:0005524
Pral4429g00003 853 MobiDBLite consensus disorder prediction 707 726 - -
Pral4429g00003 853 Gene3D Phosphorylase Kinase; domain 1 479 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4429g00003 Pral-Chr4429 12027 14968 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4429g00003 447 801 Receptor kinase-like Gene Family AT5G20050 39.467 2.00e-76 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral4429g00003 Pkinase 5.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4429g00003 - - qsa:O6P43_015213 1192.56