Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4428g00011 ATGGAATCTCAAAATGTAGATGGCCAGAAGAAAGTCCAGTTCTTAGTAGGAAACAACACTACTGCCCAGGGGGCCGTTGATGGAAAGGCCACTGAGTTGGAGAACTTATCATCTCATATGGGTTCACTTGCATTGACAGAAATGGAATGGGCTTCAAGCACCCAGCCGGAAGAATCTAATTTATTCAATCAAGATCCAAAGCACCAAAGTGCTTTGCAGGCAGAGTCTGAGTTAACTTTGAGATCTGAGGGAGGATTAAATTCCCAGTTGGCGAAAAGAACAACAGCTATTCAGGATCATCTGCAGCAGTTCAGAAACTTTTTAAGTCAGCCAGCTACTCAATCTTCAGTAGTGGGACCTTCATGTGCTACCACAACATCTGTCCATTCATCTTCAGCTCCCATGCTGAATTCAACAACCCATTATTCTTATTCACATGTTGATAGCGGTTCACATTTGGCAGCAGAACCTTTGAGGGAAAATAATGTTAATAGTCATCTGATAACTCAAGGAGTTGTGAAATCATCTAGCACTTACCTAAAAGAGACCAATAAAATGTTAGCAGGACAAGCAGCAGTTGCCCCTAGTTCTGCCGCTAATGCAGGGTTACCATCTAAGGATGGTGACCTTTGTGAGGAGCAGCAAGGCGGCATGCTAAAAGAAAGTAACGTTTCTAAAACTACTTGTGATGATAAGCCATCTAAGAGGAAAGAATCTGCAGATGTTACCAACATACAGCCTCAGGCTCCAACGTCTAGAACTTCATTTTCAGATGTTAAGTTGGACTCATCTAAGTCAGAAAAACAAGAGAAGGCAGGAAGTAGTAAAAGCACATCAGGTACTCGGAAAAGGGGCTATGATCCTGATTTGTTTTTCAAGGTAAATGGCAAGCTGTATCAAAGGCTTGGCAAGATAGGTAGTGGAGGAAGTAGTGAAGTGCACAAAGTAATATCATCAGACTGTACAATCTATGCACTTAAAAAGATCAAGCTGAAGGGTCGTGATTATGCCACTGCATATGGATTCTGTCAAGAGATTGAGTATCTAAATAGGCTGAAGGGGAAGAATAATATCATACAGCTGATTGACTATGAGGTGACTGACAAGGCTTTGCTTGATGAAGTCCTGAGAGGCTCCTTGACTAGTAAAGACAGCCGAGTCAAGGATGATGGATATATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCATATGCTGTCTCAGAAGTGGAAGGAACTGGATGGATACAACCAGACCATAGATGAGAATTGGCTCCGATTTTATTGGCAGCAAATACTTCAGGCTGTCAATACAATACACGAGGAACGTATAGTGCATTCTGACCTGAAGCCAGCTAACTTTCTTCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGCATAGCCAAAGCAATAATGAGCGATACAACAAATATCCAACGGGATTCACAGGTGGGCACTCTGAGTTACATGTCTCCAGAGGCATTTATGTGCAATGAGAGTGATGCAAATGGAAATATCATAAAGTGTGGCCGGCCATCGGATATCTGGTCTCTGGGCTGCATCCTCTATCAAATGGTATATGGCAGGACGCCATTTTCTGAGTACAAGACGTTCTGGGCGAAATTCAAAGTTATAACAGATCCGAATCATGAAATTACGTACGAGCCCGTTTCAAACCCATGGCTTCTGGATCTCATGAAGAGGTGTCTAGCATGGGACCGTAATGAAAGATGGAGAATCCCTCAGCTTCTCCAACATCCGTTTCTTGTTCCACCAACCCCGCCACAGCCTTCCCCGTTCCAAGACCAAAGTTTTAAATTGCTACAATTTATAGCTGAAACCTGTATAGATGACCCAGAAGCTTCAAAGCTCTGTTGTGAGCTCCAGCAGGTGGTTGGCGACCCACTCAAATTAATAACTCCTCACTCTCTTAGCTCACGAGATCATCAATGTAAACTATTGTCCCAATTGTCAGAACTATGTCTCCAGCTGCATGAGCGACTAAAAAGTTCAGATAGAGAAGCAAGATAG 2040 0.4275 MESQNVDGQKKVQFLVGNNTTAQGAVDGKATELENLSSHMGSLALTEMEWASSTQPEESNLFNQDPKHQSALQAESELTLRSEGGLNSQLAKRTTAIQDHLQQFRNFLSQPATQSSVVGPSCATTTSVHSSSAPMLNSTTHYSYSHVDSGSHLAAEPLRENNVNSHLITQGVVKSSSTYLKETNKMLAGQAAVAPSSAANAGLPSKDGDLCEEQQGGMLKESNVSKTTCDDKPSKRKESADVTNIQPQAPTSRTSFSDVKLDSSKSEKQEKAGSSKSTSGTRKRGYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKNNIIQLIDYEVTDKALLDEVLRGSLTSKDSRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGYNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMKRCLAWDRNERWRIPQLLQHPFLVPPTPPQPSPFQDQSFKLLQFIAETCIDDPEASKLCCELQQVVGDPLKLITPHSLSSRDHQCKLLSQLSELCLQLHERLKSSDREAR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4428g00011 679 MobiDBLite consensus disorder prediction 225 239 - -
Pral4428g00011 679 SMART serkin_6 299 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4428g00011 679 Pfam Protein kinase domain 299 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4428g00011 679 FunFam serine/threonine-protein kinase mph1 isoform X1 413 595 - -
Pral4428g00011 679 SUPERFAMILY Protein kinase-like (PK-like) 293 606 IPR011009 -
Pral4428g00011 679 FunFam serine/threonine-protein kinase mph1 isoform X2 292 379 - -
Pral4428g00011 679 ProSiteProfiles Protein kinase domain profile. 299 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4428g00011 679 MobiDBLite consensus disorder prediction 198 282 - -
Pral4428g00011 679 CDD PKc_Mps1 297 592 IPR027084 -
Pral4428g00011 679 ProSitePatterns Protein kinases ATP-binding region signature. 305 327 IPR017441 GO:0005524
Pral4428g00011 679 Gene3D Phosphorylase Kinase; domain 1 292 377 - -
Pral4428g00011 679 MobiDBLite consensus disorder prediction 51 85 - -
Pral4428g00011 679 PANTHER MIXED LINEAGE PROTEIN KINASE 36 625 - -
Pral4428g00011 679 MobiDBLite consensus disorder prediction 114 134 - -
Pral4428g00011 679 MobiDBLite consensus disorder prediction 240 259 - -
Pral4428g00011 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Pral4428g00011 679 Gene3D Transferase(Phosphotransferase) domain 1 414 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4428g00011 Pral-Chr4428 72971 76988 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4428g00011 305 593 MAP Kinase Kinase Kinase AT4G08470 29.010 3.07e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Pral4428g00011 Pkinase 4e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4428g00011 K08866 - qsa:O6P43_015223 969.918