Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4428g00010 ATGGATGGGAAGGCTAACCTTCCGGTCTCACCTCCAACTGCCAAGAACCTGATCCGTCCAATCAATCCCGATACTACATCGTCTTCCTCATCCTCCCTCTCTTCATCCTCACCGCCGGACTTTCTTCGGCATGTTCAGGCCGCCTTCAAGCGTCATCGTCCTCTCGGTACAGTGCAATCAAATATAAGACCAAGGCGCATGATGGTTCCTCAACGTGAGGTGTCAAGAAATTCTACACTAAAAGTTGGTGCAAATCTAGATAATAAGAAGTCCCAGGAGATATCCTTAAGCAAGGTTCAGTCGGAGATGGAGTCATCTGCACATGGAAATAGCACGACTTCTATGATTAGAGAAGGTCAGGAGGACGTATTAGTCACACCACCTTCTGTTTCTGGCAGTTGCAACAACGCACTTGACCAAGTATGCAATTCATTCAATGCACAAGAATGTCATTTAAATGAAATGACTAATTGTAAAGACAAGATTGCCATGCATTCTTTGCCAGTGGAATCTCAAAATGTAGATGGCCAGAAGAAAGTCCAGTTCTTAGTAGGAAACAACACTACTGCCCAGGGGGCCGTTGATGGAAAGGCCACTGAGTTGGAGAACTTATCATCTCATATGGGTTCACTTGCATTGACAGAAATGGAATGGGCTTCAAGCACCCAGCCGGAAGAATCTAATTTATTCAATCAAGATCCAAAGCACCAAAGTGCTTTGCAGGCAGAGTCTGAGTTAACTTTGAGATCTGAGGGAGGATTAAATTCCCAGTTGGCGAAAAGAACAACAGCTATTCAGGATCATCTGCAGCAGTTCAGAAACTTTTTAAGTCAGCCAGCTACTCAATCTTCAGTAGTGGGACCTTCATGTGCTACCACAACATCTGTCCATTCATCTTCAGCTCCCATGCTGAATTCAACAACCCATTATTCTTATTCACATGTTGATAGCGGTTCACATTTGGCAGCAGAACCTTTGAGGGAAAATAATGTTAATAGTCATCTGATAACTCAAGGAGTTGTGAAATCATCTAGCACTTACCTAAAAGAGACCAATAAAATGTTAGCAGGACAAGCAGCAGTTGCCCCTAGTTCTGCCGCTAATGCAGGGTTACCATCTAAGGATGGTGACCTTTGTGAGGAGCAGCAAGGCGGCATGCTAAAAGAAAGTAACGTTTCTAAAACTACTTGTGATGATAAGCCATCTAAGAGGAAAGAATCTGCAGATGTTACCAACATACAGCCTCAGGCTCCAACGTCTAGAACTTCATTTTCAGATGTTAAGTTGGACTCATCTAAGTCAGAAAAACAAGAGAAGGCAGGAAGTAGTAAAAGCACATCAGGTACTCGGAAAAGGGGCTATGATCCTGATTTGTTTTTCAAGGTAAATGGCAAGCTGTATCAAAGGCTTGGCAAGATAGGTAGTGGAGGAAGTAGTGAAGTGCACAAAGTAATATCATCAGACTGTACAATCTATGCACTTAAAAAGATCAAGCTGAAGGGTCGTGATTATGCCACTGCATATGGATTCTGTCAAGAGATTGAGTATCTAAATAGGCTGAAGGGGAAGAATAATATCATACAGCTGATTGACTATGAGGTGACTGACAAGGCTTTGCTTGATGAAGTCCTGAGAGGCTCCTTGACTAGTAAAGACAGCCGAGTCAAGGATGATGGATATATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCATATGCTGTCTCAGAAGTGGAAGGAACTGGATGGATACAACCAGACCATAGATGAGAATTGGCTCCGATTTTATTGGCAGCAAATACTTCAGGCTGTCAATACAATACACGAGGAACGTATAGTGCATTCTGACCTGAAGCCAGCTAACTTTCTTCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGCATAGCCAAAGCAATAATGAGCGATACAACAAATATCCAACGGGATTCACAGGTGGGCACTCTGAGTTACATGTCTCCAGAGGCATTTATGTGCAATGAGAGTGATGCAAATGGAAATATCATAAAGTGTGGCCGGCCATCGGATATCTGGTCTCTGGGCTGCATCCTCTATCAAATGGTATATGGCAGGACGCCATTTTCTGAGTACAAGACGTTCTGGGCGAAATTCAAAGTTATAACAGATCCGAATCATGAAATTACGTACGAGCCCGTTTCAAACCCATGGCTTCTGGATCTCATGAAGAGGTGTCTAGCATGGGACCGTAATGAAAGATGGAGAATCCCTCAGCTTCTCCAACATCCGTTTCTTGTTCCACCAACCCCGCCACAGCCTTCCCCGTTCCAAGACCAAAGTTTTAAATTGCTACAATTTATAGCTGAAACCTGTATAGATGACCCAGAAGCTTCAAAGCTCTGTTGTGAGCTCCAGCAGGTGGTTGGCGACCCACTCAAATTAATAACTCCTCACTCTCTTAGCTCACGAGATCATCAATGTAAACTATTGTCCCAATTGTCAGAACTATGTCTCCAGCTGCATGAGCGACTAAAAAGTTCAGATAGAGAAGCAAGATAG 2544 0.4328 MDGKANLPVSPPTAKNLIRPINPDTTSSSSSSLSSSSPPDFLRHVQAAFKRHRPLGTVQSNIRPRRMMVPQREVSRNSTLKVGANLDNKKSQEISLSKVQSEMESSAHGNSTTSMIREGQEDVLVTPPSVSGSCNNALDQVCNSFNAQECHLNEMTNCKDKIAMHSLPVESQNVDGQKKVQFLVGNNTTAQGAVDGKATELENLSSHMGSLALTEMEWASSTQPEESNLFNQDPKHQSALQAESELTLRSEGGLNSQLAKRTTAIQDHLQQFRNFLSQPATQSSVVGPSCATTTSVHSSSAPMLNSTTHYSYSHVDSGSHLAAEPLRENNVNSHLITQGVVKSSSTYLKETNKMLAGQAAVAPSSAANAGLPSKDGDLCEEQQGGMLKESNVSKTTCDDKPSKRKESADVTNIQPQAPTSRTSFSDVKLDSSKSEKQEKAGSSKSTSGTRKRGYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKNNIIQLIDYEVTDKALLDEVLRGSLTSKDSRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGYNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMKRCLAWDRNERWRIPQLLQHPFLVPPTPPQPSPFQDQSFKLLQFIAETCIDDPEASKLCCELQQVVGDPLKLITPHSLSSRDHQCKLLSQLSELCLQLHERLKSSDREAR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4428g00010 847 Gene3D Transferase(Phosphotransferase) domain 1 582 763 - -
Pral4428g00010 847 ProSiteProfiles Protein kinase domain profile. 467 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4428g00010 847 MobiDBLite consensus disorder prediction 408 427 - -
Pral4428g00010 847 MobiDBLite consensus disorder prediction 282 302 - -
Pral4428g00010 847 Gene3D Phosphorylase Kinase; domain 1 460 545 - -
Pral4428g00010 847 FunFam serine/threonine-protein kinase mph1 isoform X2 460 547 - -
Pral4428g00010 847 Pfam Protein kinase domain 467 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4428g00010 847 FunFam serine/threonine-protein kinase mph1 isoform X1 581 763 - -
Pral4428g00010 847 MobiDBLite consensus disorder prediction 19 40 - -
Pral4428g00010 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Pral4428g00010 847 MobiDBLite consensus disorder prediction 218 244 - -
Pral4428g00010 847 SMART serkin_6 467 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4428g00010 847 SUPERFAMILY Protein kinase-like (PK-like) 461 774 IPR011009 -
Pral4428g00010 847 MobiDBLite consensus disorder prediction 393 407 - -
Pral4428g00010 847 ProSitePatterns Protein kinases ATP-binding region signature. 473 495 IPR017441 GO:0005524
Pral4428g00010 847 MobiDBLite consensus disorder prediction 366 450 - -
Pral4428g00010 847 CDD PKc_Mps1 465 760 IPR027084 -
Pral4428g00010 847 PANTHER MIXED LINEAGE PROTEIN KINASE 26 793 - -
Pral4428g00010 847 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4428g00010 Pral-Chr4428 72971 78123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4428g00010 473 761 MAP Kinase Kinase Kinase AT4G08470 29.010 6.42e-24 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Pral4428g00010 Pkinase 6.5e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4428g00010 K08866 - qsa:O6P43_015223 1156.35