LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4428g00009	ATGGATGGGAAGGCTAACCTTCCGGTCTCACCTCCAACTGCCAAGAACCTGATCCGTCCAATCAATCCCGATACTACATCGTCTTCCTCATCCTCCCTCTCTTCATCCTCACCGCCGGACTTTCTTCGGCATGTTCAGGCCGCCTTCAAGCGTCATCGTCCTCTCGGTACAGTGCAATCAAATATAAGACCAAGGCGCATGATGGTTCCTCAACGTGAGGTGTCAAGAAATTCTACACTAAAAGTTGGTGCAAATCTAGATAATAAGAAGTCCCAGGAGATATCCTTAAGCAAGGTTCAGTCGGAGATGGAGTCATCTGCACATGGAAATAGCACGACTTCTATGATTAGAGAAGGTCAGGAGGACGTATTAGTCACACCACCTTCTGTTTCTGGCAGTTGCAACAACGCACTTGACCAAGTATGCAATTCATTCAATGCACAAGAATGTCATTTAAATGAAATGACTAATTGTAAAGACAAGATTGCCATGCATTCTTTGCCAGTGGAATCTCAAAATGTAGATGGCCAGAAGAAAGTCCAGTTCTTAGTAGGAAACAACACTACTGCCCAGGAAATGGAATGGGCTTCAAGCACCCAGCCGGAAGAATCTAATTTATTCAATCAAGATCCAAAGCACCAAAGTGCTTTGCAGGCAGAGTCTGAGTTAACTTTGAGATCTGAGGGAGGATTAAATTCCCAGTTGGCGAAAAGAACAACAGCTATTCAGGATCATCTGCAGCAGTTCAGAAACTTTTTAAGTCAGCCAGCTACTCAATCTTCAGTAGTGGGACCTTCATGTGCTACCACAACATCTGTCCATTCATCTTCAGCTCCCATGCTGAATTCAACAACCCATTATTCTTATTCACATGTTGATAGCGGTTCACATTTGGCAGCAGAACCTTTGAGGGAAAATAATGTTAATAGTCATCTGATAACTCAAGGAGTTGTGAAATCATCTAGCACTTACCTAAAAGAGACCAATAAAATGTTAGCAGGACAAGCAGCAGTTGCCCCTAGTTCTGCCGCTAATGCAGGGTTACCATCTAAGGATGGTGACCTTTGTGAGGAGCAGCAAGGCGGCATGCTAAAAGAAAGTAACGTTTCTAAAACTACTTGTGATGATAAGCCATCTAAGAGGAAAGAATCTGCAGATGTTACCAACATACAGCCTCAGGCTCCAACGTCTAGAACTTCATTTTCAGATGTTAAGTTGGACTCATCTAAGTCAGAAAAACAAGAGAAGGCAGGAAGTAGTAAAAGCACATCAGGTACTCGGAAAAGGGGCTATGATCCTGATTTGTTTTTCAAGGTAAATGGCAAGCTGTATCAAAGGCTTGGCAAGATAGGTAGTGGAGGAAGTAGTGAAGTGCACAAAGTAATATCATCAGACTGTACAATCTATGCACTTAAAAAGATCAAGCTGAAGGGTCGTGATTATGCCACTGCATATGGATTCTGTCAAGAGATTGAGTATCTAAATAGGCTGAAGGGGAAGAATAATATCATACAGCTGATTGACTATGAGGTGACTGACAAGGCTTTGCTTGATGAAGTCCTGAGAGGCTCCTTGACTAGTAAAGACAGCCGAGTCAAGGATGATGGATATATATACATGGTGCTTGAATATGGGGAAATTGATTTGGCTCATATGCTGTCTCAGAAGTGGAAGGAACTGGATGGATACAACCAGACCATAGATGAGAATTGGCTCCGATTTTATTGGCAGCAAATACTTCAGGCTGTCAATACAATACACGAGGAACGTATAGTGCATTCTGACCTGAAGCCAGCTAACTTTCTTCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGCATAGCCAAAGCAATAATGAGCGATACAACAAATATCCAACGGGATTCACAGGTGGGCACTCTGAGTTACATGTCTCCAGAGGCATTTATGTGCAATGAGAGTGATGCAAATGGAAATATCATAAAGTGTGGCCGGCCATCGGATATCTGGTCTCTGGGCTGCATCCTCTATCAAATGGTATATGGCAGGACGCCATTTTCTGAGTACAAGACGTTCTGGGCGAAATTCAAAGTTATAACAGATCCGAATCATGAAATTACGTACGAGCCCGTTTCAAACCCATGGCTTCTGGATCTCATGAAGAGGTGTCTAGCATGGGACCGTAATGAAAGATGGAGAATCCCTCAGCTTCTCCAACATCCGTTTCTTGTTCCACCAACCCCGCCACAGCCTTCCCCGTTCCAAGACCAAAGTTTTAAATTGCTACAATTTATAGCTGAAACCTGTATAGATGACCCAGAAGCTTCAAAGCTCTGTTGTGAGCTCCAGCAGGTGGTTGGCGACCCACTCAAATTAATAACTCCTCACTCTCTTAGCTCACGAGATCATCAATGTAAACTATTGTCCCAATTGTCAGAACTATGTCTCCAGCTGCATGAGCGACTAAAAAGTTCAGATAGAGAAGCAAGATAG	2475	0.4315	MDGKANLPVSPPTAKNLIRPINPDTTSSSSSSLSSSSPPDFLRHVQAAFKRHRPLGTVQSNIRPRRMMVPQREVSRNSTLKVGANLDNKKSQEISLSKVQSEMESSAHGNSTTSMIREGQEDVLVTPPSVSGSCNNALDQVCNSFNAQECHLNEMTNCKDKIAMHSLPVESQNVDGQKKVQFLVGNNTTAQEMEWASSTQPEESNLFNQDPKHQSALQAESELTLRSEGGLNSQLAKRTTAIQDHLQQFRNFLSQPATQSSVVGPSCATTTSVHSSSAPMLNSTTHYSYSHVDSGSHLAAEPLRENNVNSHLITQGVVKSSSTYLKETNKMLAGQAAVAPSSAANAGLPSKDGDLCEEQQGGMLKESNVSKTTCDDKPSKRKESADVTNIQPQAPTSRTSFSDVKLDSSKSEKQEKAGSSKSTSGTRKRGYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCTIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKNNIIQLIDYEVTDKALLDEVLRGSLTSKDSRVKDDGYIYMVLEYGEIDLAHMLSQKWKELDGYNQTIDENWLRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLSYMSPEAFMCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSEYKTFWAKFKVITDPNHEITYEPVSNPWLLDLMKRCLAWDRNERWRIPQLLQHPFLVPPTPPQPSPFQDQSFKLLQFIAETCIDDPEASKLCCELQQVVGDPLKLITPHSLSSRDHQCKLLSQLSELCLQLHERLKSSDREAR	824

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4428g00009	824	Pfam	Protein kinase domain	444	737	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4428g00009	824	MobiDBLite	consensus disorder prediction	259	279	-	-
	Pral4428g00009	824	CDD	PKc_Mps1	442	737	IPR027084	-
	Pral4428g00009	824	MobiDBLite	consensus disorder prediction	385	404	-	-
	Pral4428g00009	824	SMART	serkin_6	444	737	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4428g00009	824	Gene3D	Phosphorylase Kinase; domain 1	437	522	-	-
	Pral4428g00009	824	SUPERFAMILY	Protein kinase-like (PK-like)	438	751	IPR011009	-
	Pral4428g00009	824	MobiDBLite	consensus disorder prediction	19	40	-	-
	Pral4428g00009	824	MobiDBLite	consensus disorder prediction	370	384	-	-
	Pral4428g00009	824	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	591	603	IPR008271	GO:0004672\|GO:0006468
	Pral4428g00009	824	Gene3D	Transferase(Phosphotransferase) domain 1	559	740	-	-
	Pral4428g00009	824	FunFam	serine/threonine-protein kinase mph1 isoform X1	558	740	-	-
	Pral4428g00009	824	PANTHER	MIXED LINEAGE PROTEIN KINASE	10	770	-	-
	Pral4428g00009	824	FunFam	serine/threonine-protein kinase mph1 isoform X2	437	524	-	-
	Pral4428g00009	824	MobiDBLite	consensus disorder prediction	199	230	-	-
	Pral4428g00009	824	ProSiteProfiles	Protein kinase domain profile.	444	737	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4428g00009	824	MobiDBLite	consensus disorder prediction	343	427	-	-
	Pral4428g00009	824	ProSitePatterns	Protein kinases ATP-binding region signature.	450	472	IPR017441	GO:0005524
	Pral4428g00009	824	MobiDBLite	consensus disorder prediction	1	40	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4428g00009	Pral-Chr4428	72971	78123	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4428g00009	450	738	MAP Kinase Kinase Kinase	AT4G08470	29.010	5.55e-24	104

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TTK	Pral4428g00009		Pkinase	6.1e-56	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4428g00009	K08866		-	qsa:O6P43_015223	1113.21