Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4428g00007 ATGCGAGAGACACCAGCAATGGAGGATTTGCAGAGTGCTCTAAAGGATCGTAATTTAACGGTTTCCACCGTGGCAGATAAGGGTCGCTGCCTCTTGGCTACGAGAGATTTTTACCCAGGAGACGTGATTATAAGCCAAGAGCCTTATGTGTGTGCGCCAAATAATTCTTCAGCCGAAACAAGGTGTGATGGATGTTTCGCGACAAGTAAACTTAAAAAGTGCTCTGGTTGTCAAGTTGTATGGTATTGTGGAAGTACATGCCAGAGGGCAGAGTGGAAGTTGCATCGTCTTGAATGTGAAGTTCTCTCAAGGCTGGAAAAGGACAAGAGAAAATTTGTCACACCATCCATTCGACTGATGGTAAAACTTTATCTTCGAAGGAAGTTGCAAAGTGAAAAGGTTATCCCAAGCACTGCTACAGACAACTATAGCTTGGTGGAGGCATTAGTGGCACACATGTCTGACATCAATGAGGGACAGCTGGTTCTGTACGCGCAGATGGCTAATCTTGTAAACTTAATATTACAGTGGCCTGAAATCAACATAAAAGAGATTGCGGAAAATTTTTCCAGGTTTGCATGTAATGCGCATACCATTTGCGACAGTGAACTGAGACCCTTGGGGACAGGATTGTATCCTGTAATTTCCATAATCAACCACAGTTGCTTGCCCAATTCAGTGTTGGTTTTTGAGGGAAGGTCAGCTGTAGTACGTGCTGTGCAACATATACCCAAAGGTTCGGAGGTGCTGATAAGTTACATAGAGACTGCTGGGAGCACTATGACTCGGCAGAAGGCTCTCAAAGAGCAGTACCTGTTCACTTGCACCTGTCCCCGCTGTGCTAGAATGGGACAATCTGATGATATTCGAGAAAGCGCAATTTTGGAAGGATACAGATGCAAGAATGAAAAATGCTATGGTTTCTTGATGCGTACTAATGATGGAAGAGGATTCCAATGCCAAGAATGTGGACTAGTCAGGGACATGGAAGAGATAAAGTTGATTGCAACGGAAGTAAAATCACTAACTGAAGATAAAGCTTCTAAACTTGATCCAACTGGCAATTATCAGGATGCTGTTGCTGCATACAAAATAATTGAGAAATTGCAATCAGAATTATGCCATCCCTTTTCAATCAGCTTGATGCAAACTCGAGAAAAGCTTTTGAAGTTATTGATGGAGGTGGAACATTGGAGAGAAGCTCTGGCATACTGCAAATTGACCTTACCAGTCTATCAAAGAGTTTATCCAGCAGTTCATCCATTGCTTGGTTTGCAATATTATACTTGTGGAAAGCTTGAATGGTATATGGGGGACACGGAGGGTGCTGTTAAATCGCTGACCAAGGCAGTGGATGTTCTAAGAATCACTCATGGGACAAATACACCTTTCATGAAGGAACTCTTGATGAAGTTGGAAGAAGCCCGTGCGGAAGCCTCTTACCAACAGTCCTCCAAAGACAAGTAG 1467 0.4329 MRETPAMEDLQSALKDRNLTVSTVADKGRCLLATRDFYPGDVIISQEPYVCAPNNSSAETRCDGCFATSKLKKCSGCQVVWYCGSTCQRAEWKLHRLECEVLSRLEKDKRKFVTPSIRLMVKLYLRRKLQSEKVIPSTATDNYSLVEALVAHMSDINEGQLVLYAQMANLVNLILQWPEINIKEIAENFSRFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRSAVVRAVQHIPKGSEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCARMGQSDDIRESAILEGYRCKNEKCYGFLMRTNDGRGFQCQECGLVRDMEEIKLIATEVKSLTEDKASKLDPTGNYQDAVAAYKIIEKLQSELCHPFSISLMQTREKLLKLLMEVEHWREALAYCKLTLPVYQRVYPAVHPLLGLQYYTCGKLEWYMGDTEGAVKSLTKAVDVLRITHGTNTPFMKELLMKLEEARAEASYQQSSKDK 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4428g00007 488 Pfam MYND finger 62 99 IPR002893 -
Pral4428g00007 488 ProSitePatterns Zinc finger MYND-type signature. 62 99 IPR002893 -
Pral4428g00007 488 Gene3D SET domain 30 280 IPR046341 -
Pral4428g00007 488 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 21 474 - -
Pral4428g00007 488 Gene3D - 112 196 - -
Pral4428g00007 488 ProSiteProfiles SET domain profile. 17 254 IPR001214 GO:0005515
Pral4428g00007 488 SUPERFAMILY SET domain 6 253 IPR046341 -
Pral4428g00007 488 Gene3D - 61 111 - -
Pral4428g00007 488 SUPERFAMILY TPR-like 350 453 IPR011990 GO:0005515
Pral4428g00007 488 SMART set_7 17 260 IPR001214 GO:0005515
Pral4428g00007 488 ProSiteProfiles Zinc finger MYND-type profile. 62 99 IPR002893 -
Pral4428g00007 488 Gene3D Tetratricopeptide repeat domain 408 487 IPR011990 GO:0005515
Pral4428g00007 488 Pfam SET domain 28 253 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4428g00007 Pral-Chr4428 66536 72671 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4428g00007 SET 2.8e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4428g00007 K11426 - qsa:O6P43_015224 803.127