Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4428g00006 ATGCGAGAGACACCAGCAATGGAGGATTTGCAGAGTGCTCTAAAGGATCGTAATTTAACGGTTTCCACCGTGGCAGATAAGGGTCGCTGCCTCTTGGCTACGAGAGATTTTTACCCAGGAGACGTGATTATAAGCCAAGAGCCTTATGTGTGTGCGCCAAATAATTCTTCAGCCGAAACAAGGTGTGATGGATGTTTCGCGACAAGTAAACTTAAAAAGTGCTCTGGTTGTCAAGTTGTATGGTATTGTGGAAGTACATGCCAGAGGGCAGAGTGGAAGTTGCATCGTCTTGAATGTGAAGTTCTCTCAAGGCTGGAAAAGGACAAGAGAAAATTTGTCACACCATCCATTCGACTGATGGTAAAACTTTATCTTCGAAGGAAGTTGCAAAGTGAAAAGGTTATCCCAAGCACTGCTACAGACAACTATAGCTTGGTGGAGGCATTAGTGGCACGTATCCTTTTGTCATATTTTGTCTTTATGTCTATTGTACTTAACACGGTTCTGTATATGTTTTCTCACATATCAATGATGATTGTTATTTTTGACACACACTTCCATCTAGACATGTCTGACATCAATGAGGGACAGCTGGTTCTGTACGCGCAGATGGCTAATCTTGTAAACTTAATATTACAGTGGCCTGAAATCAACATAAAAGAGATTGCGGAAAATTTTTCCAGGTTTGCATGTAATGCGCATACCATTTGCGACAGTGAACTGAGACCCTTGGGGACAGGATTGTATCCTGTAATTTCCATAATCAACCACAGTTGCTTGCCCAATTCAGTGTTGGTTTTTGAGGGAAGGTCAGCTGTAGTACGTGCTGTGCAACATATACCCAAAGGTTCGGAGGTGCTGATAAGTTACATAGAGACTGCTGGGAGCACTATGACTCGGCAGAAGGCTCTCAAAGAGCAGTACCTGTTCACTTGCACCTGTCCCCGCTGTGCTAGAATGGGACAATCTGATGATATTCGAGAAAGCGCAATTTTGGAAGGATACAGATGCAAGAATGAAAAATGCTATGGTTTCTTGATGCGTACTAATGATGGAAGAGGATTCCAATGCCAAGAATGTGGACTAGTCAGGGACATGGAAGAGATAAAGTTGATTGCAACGGAAGTAAAATCACTAACTGAAGATAAAGCTTCTAAACTTGATCCAACTGGCAATTATCAGGATGCTGTTGCTGCATACAAAATAATTGAGAAATTGCAATCAGAATTATGCCATCCCTTTTCAATCAGCTTGATGCAAACTCGAGAAAAGCTTTTGAAGTTATTGATGGAGGTGGAACATTGGAGAGAAGCTCTGGCATACTGCAAATTGACCTTACCAGTCTATCAAAGAGTTTATCCAGCAGTTCATCCATTGCTTGGTTTGCAATATTATACTTGTGGAAAGCTTGAATGGTATATGGGGGACACGGAGGGTGCTGTTAAATCGCTGACCAAGGCAGTGGATGTTCTAAGAATCACTCATGGGACAAATACACCTTTCATGAAGGAACTCTTGATGAAGTTGGAAGAAGCCCGTGCGGAAGCCTCTTACCAACAGTCCTCCAAAGACAAATGA 1578 0.4233 MRETPAMEDLQSALKDRNLTVSTVADKGRCLLATRDFYPGDVIISQEPYVCAPNNSSAETRCDGCFATSKLKKCSGCQVVWYCGSTCQRAEWKLHRLECEVLSRLEKDKRKFVTPSIRLMVKLYLRRKLQSEKVIPSTATDNYSLVEALVARILLSYFVFMSIVLNTVLYMFSHISMMIVIFDTHFHLDMSDINEGQLVLYAQMANLVNLILQWPEINIKEIAENFSRFACNAHTICDSELRPLGTGLYPVISIINHSCLPNSVLVFEGRSAVVRAVQHIPKGSEVLISYIETAGSTMTRQKALKEQYLFTCTCPRCARMGQSDDIRESAILEGYRCKNEKCYGFLMRTNDGRGFQCQECGLVRDMEEIKLIATEVKSLTEDKASKLDPTGNYQDAVAAYKIIEKLQSELCHPFSISLMQTREKLLKLLMEVEHWREALAYCKLTLPVYQRVYPAVHPLLGLQYYTCGKLEWYMGDTEGAVKSLTKAVDVLRITHGTNTPFMKELLMKLEEARAEASYQQSSKDK 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4428g00006 525 ProSitePatterns Zinc finger MYND-type signature. 62 99 IPR002893 -
Pral4428g00006 525 SMART set_7 17 297 IPR001214 GO:0005515
Pral4428g00006 525 Pfam SET domain 28 290 IPR001214 GO:0005515
Pral4428g00006 525 Gene3D Tetratricopeptide repeat domain 295 525 IPR011990 GO:0005515
Pral4428g00006 525 ProSiteProfiles SET domain profile. 17 291 IPR001214 GO:0005515
Pral4428g00006 525 SUPERFAMILY SET domain 19 315 IPR046341 -
Pral4428g00006 525 Gene3D SET domain 210 290 IPR046341 -
Pral4428g00006 525 Pfam MYND finger 62 99 IPR002893 -
Pral4428g00006 525 SUPERFAMILY SET domain 6 133 IPR046341 -
Pral4428g00006 525 Gene3D - 52 101 - -
Pral4428g00006 525 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 21 511 - -
Pral4428g00006 525 ProSiteProfiles Zinc finger MYND-type profile. 62 99 IPR002893 -
Pral4428g00006 525 SUPERFAMILY TPR-like 387 490 IPR011990 GO:0005515
Pral4428g00006 525 ProSitePatterns TatD deoxyribonuclease family signature 1. 181 189 IPR018228 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4428g00006 Pral-Chr4428 66536 72671 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4428g00006 SET 1.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4428g00006 K11426 - qsa:O6P43_015224 782.711