Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4427g00005 ATGGCAGCAACCGTCAGCAACCATCAATATGCTGGCCCTTTGAGCGGGGTTGCTAGTTCCTTCAACGTCTCCCTTGATTTTAACTTCCCTCCCACCAACTTCGAGGAATCCAAAGCCTCGTCAAAGGACTTGGATTCCTCCAGCGAAGATGAAAACGACGCCGAAGAGTGGAAGGACGTTATACAAAAAGCTAACTCCGAAGCGGAGAGCTGGATGGAACACAATGCTTCATTGCCCCGTGTGCCGGGAAAAAACTACATCAACTGGGAACCACCCATCACCCTCATGAATCACAGCTTCATCACCCCCATCCCCCTCCACTTTGTACGTAACCACGGCCCCACCCCTAATACCCGTTGGGATGACTGGACCGTCGAGGTCAGTGGCCTCGTCAAACGCCCCGCAGAATTCACCATGAACCAACTCGTCAACCAGTTCCCCAGCCGCGAGTTCCCGGTCACGCTGGTGTGTGCCGGCAACAGAAGGGCAGAACAAACCATGGTGAGGCAGAGCATCGGTTATAACTGGCGTGTGGGTGCCGCTTCCACTTCGATCTGGCGTGGGGTGCCGTTGAGGTACTTGCTCAAGAGGTGCGGGATCTACAGCCGCACCAAAGGAGCTTTGTACGTGTGTTATGAAGGAGATGAGGATCTGCCAGGTGGCGGTGGGTCCAAGTACGGAACAAGCATCAAGAGAGAGATCGCGATGGATCCGACCCGCGACGTCATCCTCGCTTATATGCAAAACGGAGAGCGCTTGGCTCCGGAATTTGGCTTCCCGGTGAGGATGATCGTGCCGGGTTTCATCGCCGGTCGCATGGTGAAGTGGCTCAAGCGCATCATTGTAACTTCACAAGAATCGCAAAACCACTACCACTATAAGGACAATAGAGTATTTCCCTCCCACGTGGATGCCGAGCTTGCCAACGCTGAAGGTTGGTGGTACAAGCCTGAGTATATTATCAACGAGCTCAACGTAAATTCTGTTATAACCACGCCGTGTCACGGGGAGATCTTGCCCATAAACTCATCGACAACTCAAAAGCCGTATGTGTTGAGAGGCTACGCATATTCCGGGGGCGGGAGAAAGGTGACACGTGTCGAGGTGACAATGGACGGAGGGGAAACGTGGTCACTGGCCACGTTGGAACGCTCGGAGAAACCGAACAAGTACGGCAAATACTGGTGCTGGAGTCTCTGGTCGTTGGAAGTGGAGGCGCTGGACCTTTTACGAGACAAGGAAATCGCCGTACGAGCATGGGACGAGGCCCTCAACACCCAGCCCGAGAAGCTCATTTGGAATGTCAAGGGTATGATGAACAACTGCTGGTTCAAAGTGAAGACCAAGGTGTGCATACTCCTTGAGGGGGGAACTGGAATTATGTTTGAGCATCCGACCATACAATCGAACCCTTCTCGCAAGTTGAAGACATCGGAGTCCAACAAGAGCGTCACAACGCCCTTTATGAACAACAGCGCCTCCAATATGTACTCCATCTCTGAAGTCAAGAAGCACACCTCCCCCGCTTCTGCTTGGATCATCGTTCACGGCTACGTCTACGACTGCACCCGCTTCCTCAAAGATCACCCCGGCGGCCCCGAAATCATCCTCATCAACGCCGGCACCGACTGCACCGAAGAGTTCGAAGCCATCCATTCTAAGGAAGCCAACAAAATGCTCGAGGACTACCGAATTGGTGAGATCATGACTACCGGTTACGCCCCCCCTGACTCATCGCCCAACACCTCCCTGCACGGCAATGGCGATATCAGCCACTTAACACCAATCACGGAAGCCCCACCATTACGCAGCGTGGCCCTCAACCCACGTGAGAAAATCCCATGCAAGCTCGTCTCCAAAGCGTCCATCTCACGCGACGCGAGACTTTTCCGTTTTGCGCTACCCTCCGAAGACCAAATCATGGGTCTGCCGGTGGGAAAGCACATATTCGTATGTGCCAACATTGAGGATAAGCTGTGCATGCGAGCTTACACTCCAACCACCAGCGTGGATGAAGTGGGGTATTTTGATCTGGTGGTCAAGATTTACTTCAAAGGGGTGCACCCCGAGTTCCCCAGCGGTGGGCTCATGTCTCAGCACTTGGACTCGCTTCCCATCGGTTCTGCGGTGGAAGTGAAGGGTCCGCTCGGCCACATAGAGTACACTGGAAGAGGTCAGTTTTTGGTTCACGGGAAGCCCAAGTTTGCAAAGAGGCTTGCCATGTTTGCAGGTGGGACCGGAATTGCGCCCATTTATCAGGTGGCGCGAGCCATTCTGAAAGACCCAGAGGACCGGACCGAGATGCACATTATGTTTGCGAACCGGACGGAGGATGATATTCTGCTGAGAGAAGAGCTCGACGAGTGGGCTGAGAAAGGTGACCGGTTCAAGGTGTGGTACGTGGTGCAAGAAAGCAAGAGTGAAGGGTGGGAATATAGTGTGGGTTTCATCACGGAGGATATCCTGAGGGAGCATGCCCCCAAGGCATCAGATGACACGCTGGCATTAGCTTGTGGGCCACCACCCATGATTCAGTTTGCAGTGCAGCCGAATTTGGAGAAACTGGGGTACGACATCAACAACAACTTGCTTGTGTTTTAG 2601 0.5356 MAATVSNHQYAGPLSGVASSFNVSLDFNFPPTNFEESKASSKDLDSSSEDENDAEEWKDVIQKANSEAESWMEHNASLPRVPGKNYINWEPPITLMNHSFITPIPLHFVRNHGPTPNTRWDDWTVEVSGLVKRPAEFTMNQLVNQFPSREFPVTLVCAGNRRAEQTMVRQSIGYNWRVGAASTSIWRGVPLRYLLKRCGIYSRTKGALYVCYEGDEDLPGGGGSKYGTSIKREIAMDPTRDVILAYMQNGERLAPEFGFPVRMIVPGFIAGRMVKWLKRIIVTSQESQNHYHYKDNRVFPSHVDAELANAEGWWYKPEYIINELNVNSVITTPCHGEILPINSSTTQKPYVLRGYAYSGGGRKVTRVEVTMDGGETWSLATLERSEKPNKYGKYWCWSLWSLEVEALDLLRDKEIAVRAWDEALNTQPEKLIWNVKGMMNNCWFKVKTKVCILLEGGTGIMFEHPTIQSNPSRKLKTSESNKSVTTPFMNNSASNMYSISEVKKHTSPASAWIIVHGYVYDCTRFLKDHPGGPEIILINAGTDCTEEFEAIHSKEANKMLEDYRIGEIMTTGYAPPDSSPNTSLHGNGDISHLTPITEAPPLRSVALNPREKIPCKLVSKASISRDARLFRFALPSEDQIMGLPVGKHIFVCANIEDKLCMRAYTPTTSVDEVGYFDLVVKIYFKGVHPEFPSGGLMSQHLDSLPIGSAVEVKGPLGHIEYTGRGQFLVHGKPKFAKRLAMFAGGTGIAPIYQVARAILKDPEDRTEMHIMFANRTEDDILLREELDEWAEKGDRFKVWYVVQESKSEGWEYSVGFITEDILREHAPKASDDTLALACGPPPMIQFAVQPNLEKLGYDINNNLLVF 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4427g00005 866 Pfam Mo-co oxidoreductase dimerisation domain 319 450 IPR005066 GO:0016491|GO:0030151
Pral4427g00005 866 FunFam Nitrate reductase 323 495 - -
Pral4427g00005 866 CDD cyt_b5_reduct_like 615 866 - -
Pral4427g00005 866 FunFam NADH-cytochrome b5 reductase 602 716 - -
Pral4427g00005 866 Pfam Oxidoreductase FAD-binding domain 615 721 IPR008333 -
Pral4427g00005 866 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 710 861 IPR039261 -
Pral4427g00005 866 Pfam Oxidoreductase molybdopterin binding domain 112 291 IPR000572 -
Pral4427g00005 866 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 492 572 IPR036400 -
Pral4427g00005 866 MobiDBLite consensus disorder prediction 32 56 - -
Pral4427g00005 866 SMART Cyt_b5_2 497 569 IPR001199 -
Pral4427g00005 866 Coils Coil 47 67 - -
Pral4427g00005 866 PRINTS Cytochrome B5 signature 544 551 IPR001199 -
Pral4427g00005 866 PRINTS Cytochrome B5 signature 529 543 IPR001199 -
Pral4427g00005 866 PRINTS Cytochrome B5 signature 556 568 IPR001199 -
Pral4427g00005 866 PRINTS Cytochrome B5 signature 519 529 IPR001199 -
Pral4427g00005 866 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 494 569 IPR001199 -
Pral4427g00005 866 FunFam Nitrate reductase [NADH] 717 866 - -
Pral4427g00005 866 FunFam Nitrate reductase 65 313 - -
Pral4427g00005 866 FunFam Sulfite oxidase, mitochondrial 492 572 - -
Pral4427g00005 866 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 525 532 IPR018506 GO:0020037
Pral4427g00005 866 PANTHER SULFITE REDUCTASE 43 450 - -
Pral4427g00005 866 SUPERFAMILY Oxidoreductase molybdopterin-binding domain 72 321 IPR036374 -
Pral4427g00005 866 PIRSF Nitr_rd_NADH 4 865 IPR012137 GO:0006809|GO:0042128|GO:0050464
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 418 430 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 179 194 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 237 253 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 366 378 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 393 403 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 431 444 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 321 333 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 254 267 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 100 116 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 164 176 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 270 283 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 352 366 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 79 93 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Eukaryotic molybdopterin domain signature 153 164 IPR008335 GO:0016491
Pral4427g00005 866 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 766 775 IPR001709 GO:0016491
Pral4427g00005 866 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 810 826 IPR001709 GO:0016491
Pral4427g00005 866 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 834 842 IPR001709 GO:0016491
Pral4427g00005 866 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 662 669 IPR001709 GO:0016491
Pral4427g00005 866 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 778 789 IPR001709 GO:0016491
Pral4427g00005 866 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 740 759 IPR001709 GO:0016491
Pral4427g00005 866 Pfam Cytochrome b5-like Heme/Steroid binding domain 500 568 IPR001199 -
Pral4427g00005 866 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 610 722 IPR017927 GO:0016491
Pral4427g00005 866 Gene3D Translation factors 602 716 - -
Pral4427g00005 866 SUPERFAMILY Riboflavin synthase domain-like 603 722 IPR017938 -
Pral4427g00005 866 SUPERFAMILY E set domains 323 450 IPR014756 -
Pral4427g00005 866 Gene3D - 717 866 IPR039261 -
Pral4427g00005 866 Gene3D - 61 312 IPR036374 -
Pral4427g00005 866 ProSitePatterns Eukaryotic molybdopterin oxidoreductases signature. 129 164 IPR022407 GO:0043546
Pral4427g00005 866 Pfam Oxidoreductase NAD-binding domain 741 848 IPR001433 GO:0016491
Pral4427g00005 866 Gene3D - 494 571 IPR036400 -
Pral4427g00005 866 Gene3D - 323 493 - -
Pral4427g00005 866 PRINTS Cytochrome B5 reductase signature 834 842 - -
Pral4427g00005 866 PRINTS Cytochrome B5 reductase signature 641 652 - -
Pral4427g00005 866 PRINTS Cytochrome B5 reductase signature 707 721 - -
Pral4427g00005 866 PRINTS Cytochrome B5 reductase signature 778 789 - -
Pral4427g00005 866 PRINTS Cytochrome B5 reductase signature 740 759 - -
Pral4427g00005 866 PRINTS Cytochrome B5 reductase signature 662 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4427g00005 Pral-Chr4427 17722 20788 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4427g00005 603 857 NADPH P450 reductases AT5G17770 39.535 1.84e-50 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4427g00005 K10534 - qsa:O6P43_015229 1297.34