Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4426g00019 ATGGGTTCAGTGCCGGCTCAAGTTTCCACCATGAGGGAGCAGGGCCACCTATATGTTGAGGACACTGGTCAGGCAGAGAGGTCCCAGTGGATATTAAATTCACCTAGCCCACCACCTCTCTGGACTAAGCTGTTCGATCTCAAGGAGGCCATACTTCGTGGAAACAACTTTTCTCCATCCAAGAAGAAGGTTTTCCACAGACAAGCTGCGTCCTTCTTTCTGAACTTATTCCCAATCCTTAGCTGGTTAAGAGAGTACAAAGCTTCTAAGTTTAAAGATGATCTGCTTGCTGGTTTAACTCTTGCCAGCCTCAGCATACCTCAGAGCATAGGATATGCTTCTTTGGCAAGACTTGATCCTCAATATGGCCTGTATACAAGTGTGGTTCCTCCTCTTATCTATGCTGTAATGGGGAGTTCAAGAGAAATAGCAATTGGACCCGTGGCCGTAGTATCATTGCTGCTATCTTCCCTGCTCTCGCAAGTGGAAGATCCCGTTGCTAACCCCATTGCCTATAGAAACCTTGCCTTCACGGTGACATTCTTTGCCGGAATCTTTCAAGCAACATTTGGAATTTTTAGGCTGGGTTTTCTGGTGGATTTTCTTTCCCATGCCGCGTTGGTTGGATTCATGGCAGGTGCAGCAATCATGATTGGTCTTCAGCAGCTCAAGGGGCTGCTGGGAATTACACACTTCACCAACAAAACTGATGCAGTATCTGTTTTGGAGTCTGTCTACAAGTCACTTCATGAACAGATAACTTCAAATTCTGCAGATAAATGGTACCCGTTGAATTTTGTCGTGGGATGCTCGTTCCTGATTTTCCTCCTCCTTAGCCGGGTTATTGGAAGAAGAAACAAAAAGCTGTTCTGGTTGCCTGCTATCGCACCTCTCCTATCGGTTATTCTGTCAACTTTAATTGTATATTTGACAAGAGCCGATAAGCACGGAGTTAATATAATAAAGCGCGTCAAAGGAGGCCTGAATCCTAGTTCAGCTCACCTTTTACAATTCCATGGCCAACATGTTGGACAGACAGCAAAAATCGGCCTGATTTCTGCCATCATCGCTCTCACTGAATCTATAGCTGTTGGCCGGTCTTTCGCTGCCATTAGAGGCTACAATCTTGACGGAAACAAAGAAATGTTAGCAATGGGGTTCACGAACATTGCAGGCTCTTTAACTTCATGCTATGTGGCAACTGGATCTTTCTCAAGGACTGCGGTAAATTTCAGCGCAGGATGTCAAACGGCCATATCAAACATTGTGATGGCGGTGACGGTGTTTTTGTCACTACAATTACTCACAAGGCTCTTATACTACACCCCAGTGGCTATACTTGCTTCCATCATTATTTCGGCACTTCCCGGACTTATTGACATAAACGAGGCTTATCACATCTGGAAGGTCGACAAATTCGACTTTCTTGCCTGCATTGTGCTTTTTCTTGGCGTCTTGTTTAAATCCGTAGAGATTGGGCTCCTCGTTGCCGTAATAATCTCGTTTGCGAAGATACTGATTCAATCAATTCGGCCCGGAATAGAAGTTCTGGGGAGAGTTCCAAGAACAGAAGCATTTTGTGATGTCAGTCAGTATCCCATGGCCATAAGTACTCCTGGCGTCTCGGTTATTCGCATAAGCTCTGGCTCCCTTTGCTTCGCAAACGCTAACTTCGTCAGAGAAAGAATACTGGAACGGGTCGCAAGAGAAGATCAGACCGCACAATCAAGGGTGCAAGCGGTGGTCCTGGACATGACCAACCTGATGGATGTTGATACTTCTGGAATTATTGCACTGGAGGAACTGCACAAAAGGCTGCAATCCGGCGGCATAGAACTAGCTATGGTGAACCCAAGGTGGCAAGTGATTCACAAGCTTAAAGTGACGCAATTTGTGGATAAGATCGGAAAAGAAAGGTTTTTTCTTACGGCTGCAGAAGCTGTTGACGCGTCTTTGGCTACTAAATTTGTGGCTCCTTGA 1980 0.4566 MGSVPAQVSTMREQGHLYVEDTGQAERSQWILNSPSPPPLWTKLFDLKEAILRGNNFSPSKKKVFHRQAASFFLNLFPILSWLREYKASKFKDDLLAGLTLASLSIPQSIGYASLARLDPQYGLYTSVVPPLIYAVMGSSREIAIGPVAVVSLLLSSLLSQVEDPVANPIAYRNLAFTVTFFAGIFQATFGIFRLGFLVDFLSHAALVGFMAGAAIMIGLQQLKGLLGITHFTNKTDAVSVLESVYKSLHEQITSNSADKWYPLNFVVGCSFLIFLLLSRVIGRRNKKLFWLPAIAPLLSVILSTLIVYLTRADKHGVNIIKRVKGGLNPSSAHLLQFHGQHVGQTAKIGLISAIIALTESIAVGRSFAAIRGYNLDGNKEMLAMGFTNIAGSLTSCYVATGSFSRTAVNFSAGCQTAISNIVMAVTVFLSLQLLTRLLYYTPVAILASIIISALPGLIDINEAYHIWKVDKFDFLACIVLFLGVLFKSVEIGLLVAVIISFAKILIQSIRPGIEVLGRVPRTEAFCDVSQYPMAISTPGVSVIRISSGSLCFANANFVRERILERVAREDQTAQSRVQAVVLDMTNLMDVDTSGIIALEELHKRLQSGGIELAMVNPRWQVIHKLKVTQFVDKIGKERFFLTAAEAVDASLATKFVAP 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4426g00019 659 SUPERFAMILY SpoIIaa-like 538 649 IPR036513 -
Pral4426g00019 659 CDD STAS_SulP_like_sulfate_transporter 532 643 - -
Pral4426g00019 659 Pfam Sulfate permease family 91 480 IPR011547 GO:0016020
Pral4426g00019 659 Pfam STAS domain 532 647 IPR002645 -
Pral4426g00019 659 PANTHER SULFATE TRANSPORTER 57 651 IPR001902 GO:0016020|GO:0055085
Pral4426g00019 659 ProSitePatterns EF-hand calcium-binding domain. 590 602 IPR018247 -
Pral4426g00019 659 FunFam Sulfate transporter 31 511 654 - -
Pral4426g00019 659 ProSiteProfiles STAS domain profile. 548 651 IPR002645 -
Pral4426g00019 659 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Pral4426g00019 659 NCBIfam sulfate permease 78 647 IPR001902 GO:0016020|GO:0055085
Pral4426g00019 659 Gene3D STAS domain 511 653 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4426g00019 Pral-Chr4426 120623 124096 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4426g00019 24 655 Inorganic Solute Cotransporters AT5G10180 62.969 0.0 822
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4426g00019 K17469 - gmx:100798723 973.77