Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4426g00007 ATGACCAACCAGAATGTGATGGCCCCTGATTTGAAATCACAAATGAATACCGTTATTGCGGTGTTGATGTCGATTTCGAATTCACCTATGTTGCCCGGAGCAGGGGTCCCCGAATCCATGGCTGTGCTTCGTCAGTTTCTGGGGACATCCCAGAAAAAGCTCATGAAAAGGCTCAAGGACGGAGAAGGCAAAGGAGGAGCTAAGGTCACCTCCTGGGTCGATTCAATGAGAGCTTCTTCTCCGCCCAGAGTCAAATCCACCGTCCATGCTTGTGAAAACTCAGACATAAGTTCTGGGATTCTTCATCATCCTTCAGCGCTCAACGTGTTTGATCAGATAATATATAAGTCAAGAGGAAAGAAGATCATAACCTTTCTTGACTACGATGGAACTCTCTCCCCGATTGTTGCAGACCCCGAGAAAGCATTCATGACCGAAAAGATGAGAGAAACGGTGAAGGACATTGCCAGACATTTTCCCACAGCCATCGTGACTGGGAGGTGCATAGACAAGGTGTATAACTTTGTAAGACTAGCAGAACTGTACTATGCAGGCAGCCATGGCATGGACATCAAGGGGCCAACGAAGACGCGAAACTCTGAGAAAGGCAAACGAGCAGTCCTCTTCCAACCTGCGAGCCAGTTCTTGCCCATGATCGACGAGGTGTTTAAAATCTTGGTAGAAAAAACAAAGTCTGTTCCGGGGGCTATGGTGGAGAATAACAAGTTTTGCTTGTCCGTGCACTTCCGTTGTGTGGAAGAGAAGAGTTGGGTTGCATTGGCAGAGCAAGTAAGATCAGTGCTCAACAATTATCCAAAACTTAGACTTACCCAAGGAAGAAAAGTTCTGGAGATCCGTCCAAACATCAAGTGGGACAAGGGCAAAGCTCTTGAGTTTTTGTTGCGGTCACTAGGATATGCGAATTCTAAAGACGTGTTCCCGATTTATATTGGTGATGACCGAACTGACGAGGATGCTTTTAAGGTCTTACGCAGCAGAGGTCAGGGGATTGGGATTTTAGTTTCTAAAGTCCCAAGAGAAACAGAGGCTTCCTACACTTTGCAAGATCCATCGGAAGTTGAGCAGTTTCTACGGCGTTTGGTGGAATGGAAGAGAAGGAGGGTCAATCCCACAAAAAGTTTGTAG 1146 0.4651 MTNQNVMAPDLKSQMNTVIAVLMSISNSPMLPGAGVPESMAVLRQFLGTSQKKLMKRLKDGEGKGGAKVTSWVDSMRASSPPRVKSTVHACENSDISSGILHHPSALNVFDQIIYKSRGKKIITFLDYDGTLSPIVADPEKAFMTEKMRETVKDIARHFPTAIVTGRCIDKVYNFVRLAELYYAGSHGMDIKGPTKTRNSEKGKRAVLFQPASQFLPMIDEVFKILVEKTKSVPGAMVENNKFCLSVHFRCVEEKSWVALAEQVRSVLNNYPKLRLTQGRKVLEIRPNIKWDKGKALEFLLRSLGYANSKDVFPIYIGDDRTDEDAFKVLRSRGQGIGILVSKVPRETEASYTLQDPSEVEQFLRRLVEWKRRRVNPTKSL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4426g00007 381 FunFam Trehalose 6-phosphate phosphatase 212 288 - -
Pral4426g00007 381 CDD HAD_TPP 125 360 - -
Pral4426g00007 381 NCBIfam trehalose-phosphatase 120 368 IPR003337 GO:0003824|GO:0005992
Pral4426g00007 381 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 47 375 IPR044651 GO:0004805|GO:0005992
Pral4426g00007 381 NCBIfam HAD-IIB family hydrolase 125 332 IPR006379 -
Pral4426g00007 381 FunFam Trehalose 6-phosphate phosphatase 218 376 - -
Pral4426g00007 381 SUPERFAMILY HAD-like 125 371 IPR036412 -
Pral4426g00007 381 Gene3D - 219 379 IPR023214 -
Pral4426g00007 381 Gene3D - 122 208 IPR023214 -
Pral4426g00007 381 Pfam Trehalose-phosphatase 125 358 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4426g00007 Pral-Chr4426 54339 56486 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4426g00007 114 367 Trehalose Biosynthesis Gene Families AT1G70290 27.473 1.49e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4426g00007 K01087 - gmx:100788641 541.576