Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4426g00006 ATGACCAACCAGAATGTGATGGCCCCTGATTTGAAATCACAAATGAATACCGTTATTGCGGTGTTGATGTCGATTTCGAATTCACCTATGTTGCCCGGAGCAGGGGTCCCCGAATCCATGGCTGTGCTTCGTCAGTTTCTGGGGACATCCCAGAAAAAGCTCATGAAAAGGCTCAAGGACGGAGAAGGCAAAGGAGGAGCTAAGGTCACCTCCTGGGTCGATTCAATGAGAGCTTCTTCTCCGCCCAGAGTCAAATCCACCGTCCATGCTTGTGAAAACTCAGACATAAGTTCTGGGATTCTTCATCATCCTTCAGCGCTCAACGTGTTTGATCAGATAATATATAAGTCAAGAGGAAAGAAGATCATAACCTTTCTTGACTACGATGGAACTCTCTCCCCGATTGTTGCAGACCCCGAGAAAGCATTCATGACCGAAAAGATGAGAGAAACGGTGAAGGACATTGCCAGACATTTTCCCACAGCCATCGTGACTGGGAGGTGCATAGACAAGGTGTATAACTTTGTAAGACTAGCAGAACTGTACTATGCAGGCAGCCATGGCATGGACATCAAGGGGCCAACGAAGACGCGAAACTCTGAGAAAGGCAAACGAGCAGTCCTCTTCCAACCTGCGAGCCAGTTCTTGCCCATGATCGACGAGGTGTTTAAAATCTTGGTAGAAAAAACAAAGTCTGTTCCGGGGGCTATGGTGGAGAATAACAAGTTTTGCTTGTCCGTGCACTTCCGTTGTGTGGAAGAGAAGAGTTGGGTTGCATTGGCAGAGCAAGTAAGATCAGTGCTCAACAATTATCCAAAACTTAGACTTACCCAAGGAAGAAAAGTTCTGGAGATCCGTCCAAACATCAAGTGGGACAAGGGCAAAGCTCTTGAGTTTTTGTTGCGGTCACTAGGATATGCGAATTCTAAAGACGTGTTCCCGATTTATATTGGTGATGACCGAACTGACGAGGATGCTTTTAAGGTAGTCTTACGCAGCAGAGGTCAGGGGATTGGGATTTTAGTTTCTAAAGTCCCAAGAGAAACAGAGGCTTCCTACACTTTGCAAGATCCATCGGAAGTTGAGCAGTTTCTACGGCGTTTGGTGGAATGGAAGAGAAGGAGGGTCAATCCCACAAAAAGTTTGTAG 1149 0.4648 MTNQNVMAPDLKSQMNTVIAVLMSISNSPMLPGAGVPESMAVLRQFLGTSQKKLMKRLKDGEGKGGAKVTSWVDSMRASSPPRVKSTVHACENSDISSGILHHPSALNVFDQIIYKSRGKKIITFLDYDGTLSPIVADPEKAFMTEKMRETVKDIARHFPTAIVTGRCIDKVYNFVRLAELYYAGSHGMDIKGPTKTRNSEKGKRAVLFQPASQFLPMIDEVFKILVEKTKSVPGAMVENNKFCLSVHFRCVEEKSWVALAEQVRSVLNNYPKLRLTQGRKVLEIRPNIKWDKGKALEFLLRSLGYANSKDVFPIYIGDDRTDEDAFKVVLRSRGQGIGILVSKVPRETEASYTLQDPSEVEQFLRRLVEWKRRRVNPTKSL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4426g00006 382 FunFam Trehalose 6-phosphate phosphatase 212 288 - -
Pral4426g00006 382 NCBIfam trehalose-phosphatase 120 369 IPR003337 GO:0003824|GO:0005992
Pral4426g00006 382 Pfam Trehalose-phosphatase 125 359 IPR003337 GO:0003824|GO:0005992
Pral4426g00006 382 CDD HAD_TPP 125 361 - -
Pral4426g00006 382 Gene3D - 219 380 IPR023214 -
Pral4426g00006 382 Gene3D - 122 208 IPR023214 -
Pral4426g00006 382 NCBIfam HAD-IIB family hydrolase 125 330 IPR006379 -
Pral4426g00006 382 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 47 376 IPR044651 GO:0004805|GO:0005992
Pral4426g00006 382 SUPERFAMILY HAD-like 125 372 IPR036412 -
Pral4426g00006 382 FunFam Trehalose 6-phosphate phosphatase 218 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4426g00006 Pral-Chr4426 54339 56486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4426g00006 114 368 Trehalose Biosynthesis Gene Families AT1G70290 26.545 9.40e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4426g00006 K01087 - gmx:100788641 536.954