Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4424g00051 ATGAGCCAGCTAATGGGTGCTACACTGGCAAGTCTTACCCTCAAGGTGTTGTATGAGGGGCAGGCAGACATTAGATTGGTGGTGACTCAGTACTCGGGTTCAACGAGTCATCTTGAGGCTATTGCATGGGAGTTCATGGCCACTTTCATCCTGATGTTCACCATTTGTGGTGTGGCCACTGATCACAGAGGGAGCAAAGACCTCGCTGGACTTGCAATAGGCACGGCAGTTCTTATCAACGTCATCGCTGTTGGGCCTATTACTGGAGCTTCCATGAATCCTGCAAGGAGTTTGGGCCCAGCTATTGTCTCCGGCGTCTTTTAA 324 0.5062 MSQLMGATLASLTLKVLYEGQADIRLVVTQYSGSTSHLEAIAWEFMATFILMFTICGVATDHRGSKDLAGLAIGTAVLINVIAVGPITGASMNPARSLGPAIVSGVF 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4424g00051 107 Pfam Major intrinsic protein 2 105 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4424g00051 107 PRINTS Major intrinsic protein family signature 43 61 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4424g00051 107 PRINTS Major intrinsic protein family signature 74 96 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral4424g00051 107 SUPERFAMILY Aquaporin-like 2 105 IPR023271 -
Pral4424g00051 107 Gene3D Glycerol uptake facilitator protein. 1 107 IPR023271 -
Pral4424g00051 107 PANTHER AQUAPORIN NIP2-1 2 106 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4424g00051 Pral-Chr4424 210401 212165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4424g00051 2 107 Major Intrinsic Protein MIP AT5G37810 46.226 2.02e-25 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4424g00051 K09874 - csav:115696216 153.68