Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4424g00050 ATGGATAAATTATGCTGTTTTAAGTCTTCCTACTCTCAGCTTGTGGCCTCACGTTCTTCATCAAGCACTGGTAAGGGGAAAAATAATGAAGGATCAATAAAGTATGGTTTTTGCCTAGTAAAAGGGAGAGCTGATCACCCTATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATTCAGGGAAAAGAGTTAGGGTTGTTTGCTATCTATGATGGCCATTTAGGAGACCGCGTACCGGCTTACTTACAGAAACATTTGCTTACTAATATCATAAAGGAGGAGGAATTCTGGGAAGACCCCACTGGATCCATCTCAAAAGCTTATGAGCGAACAGATCAGGCAATTCTAGCAAATAGTTCTGATTTGGGCCGTGGTGGGTCAACTGCTGTAACTGCAATATTGATCAATGGCCAAAGGTTGTGGATAGCTAATGTTGGAGATTCACGAGCAGTTCTTTCAAGAAAAGGTCAAGCTGAGCAAATGACTATAGACCATGAGCCCAACACAGAACGGGGCATCATTGAGAACAAAGGTGGTTTTGTTTCCAACTTACCAGGTGATGTGCCTAGAGTAAATGGACAGTTAGCTGTATCACGTGCATTTGGAGACAAGAGCCTCAAGTCACATTTGCGGTCAGACCCTGATGTACGGAATGCTGCTATAAATTCTGATATTGATATTTTAATCCTGGCAAGTGATGGACTTTGGAAGGTTATGTCTAATCAAGAGGCAGTTGATATTGCTAGAAGGATGAGAGACCCACAGAAAGCAGCTAAGCAATTAACGGCTGAAGCATTGAAAAGAGACAGTAAAGATGATATATCATGTGTTGTGGTTAGGTTTAGGGCTTGCCAATTTATGATTTATGAATTGGAGTAA 879 0.4152 MDKLCCFKSSYSQLVASRSSSSTGKGKNNEGSIKYGFCLVKGRADHPMEDYHVAKFVQIQGKELGLFAIYDGHLGDRVPAYLQKHLLTNIIKEEEFWEDPTGSISKAYERTDQAILANSSDLGRGGSTAVTAILINGQRLWIANVGDSRAVLSRKGQAEQMTIDHEPNTERGIIENKGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVRNAAINSDIDILILASDGLWKVMSNQEAVDIARRMRDPQKAAKQLTAEALKRDSKDDISCVVVRFRACQFMIYELE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4424g00050 292 SMART PP2C_SIG_2 45 281 IPR001932 -
Pral4424g00050 292 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Pral4424g00050 292 Gene3D - 29 286 IPR036457 -
Pral4424g00050 292 PANTHER PROTEIN PHOSPHATASE 27 281 IPR015655 GO:0004722|GO:0006470
Pral4424g00050 292 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Pral4424g00050 292 CDD PP2Cc 33 281 IPR001932 -
Pral4424g00050 292 SMART PP2C_4 26 279 IPR001932 -
Pral4424g00050 292 FunFam Probable protein phosphatase 2C 39 25 282 - -
Pral4424g00050 292 SUPERFAMILY PP2C-like 32 282 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4424g00050 Pral-Chr4424 202771 206357 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4424g00050 1 282 PP2C-type Phosphatase Gene Family AT1G22280 71.875 2.04e-151 423
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4424g00050 K17506 - gmx:100797292 491.886