Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4424g00038 ATGAATGATGCGATGGCCAATCACCCACACTACCGATCCCAGTTCGGCGACACCACATTAACCAAGGTGTTCGTGGGAGGACTAGCTTGGGAGACGCCCACTGAAGAATTGCATAGATACTTCGAGCAGTTCGGTGATATTCTTGAAGCCGTTATCATCAACGATAAGCATACTGGGAAGTCTAAAGGCTATGGATTCGTCACTTTCCGTGATCCAGACTCAGCAAGAAAAGCTTGTGCGGATCCCAAACCGACAATACATGGTAGAAGAGCAAATTGCAATATTGCTTCTCTAGGACGGCCTCCGCCCCCACCTTCATCTCCTCGAGGAACGAACTTATCGGTGCAAGATGGTGGTAAGGAAGGCACAGTACGAGAAAAGCCGGCCTACAATGGAGTTCCGGCAGCGGCAGCGCCACCTTCTCTGATGTACTCAGCAGCGTATAGCTATCCAACCTACACTACTGATTACGGGTATCACCAAGTCATGTTGTCCAACCCACAAGTTCAACAGCCACGATACTATCAACAAGTCTATGGACAATCACATTCACATTACTATGGGTATTCTGTTCAAACACCAACGGCTACATTTTTCACTCCCCCCCGGGCAGATCGCTTCCCAGCTGGTGCCTCCTATCCATACTACCCTACACCCATGCAAGGCTATTGTCCTCCTCTACACTTCCTTTCCCCTACTGATATTGTGATGCATTTCACTGATATGGGGTTTGGCTGTGACATGTGGCTGTGGGGGTCACATGGATTCTCGGACCCAGCAGTGAAGCTCCTTGGAGACAAAGCTGGAGTAGTTATAACTTCAGAAAGTGCCAATGGCCGGGGGAAGAACTGA 852 0.4941 MNDAMANHPHYRSQFGDTTLTKVFVGGLAWETPTEELHRYFEQFGDILEAVIINDKHTGKSKGYGFVTFRDPDSARKACADPKPTIHGRRANCNIASLGRPPPPPSSPRGTNLSVQDGGKEGTVREKPAYNGVPAAAAPPSLMYSAAYSYPTYTTDYGYHQVMLSNPQVQQPRYYQQVYGQSHSHYYGYSVQTPTATFFTPPRADRFPAGASYPYYPTPMQGYCPPLHFLSPTDIVMHFTDMGFGCDMWLWGSHGFSDPAVKLLGDKAGVVITSESANGRGKN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4424g00038 283 Gene3D - 3 110 IPR012677 -
Pral4424g00038 283 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 120 IPR000504 GO:0003723
Pral4424g00038 283 SMART rrm1_1 22 94 IPR000504 GO:0003723
Pral4424g00038 283 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 80 IPR000504 GO:0003723
Pral4424g00038 283 PANTHER BOULE-RELATED 10 228 - -
Pral4424g00038 283 MobiDBLite consensus disorder prediction 96 127 - -
Pral4424g00038 283 SUPERFAMILY RNA-binding domain, RBD 20 113 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4424g00038 Pral-Chr4424 167637 171071 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4424g00038 17 97 C2H2 Transcription Factor Family AT2G19380 40.741 2.63e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4424g00038 K25006 - gmx:100787086 273.478