LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4424g00033	ATGGCGGCTGCTACCGCTCCTTCGCCTCGCGAAGAGTTCGTCTACATGGCCAAGCTTGCCGAACAAGCCGAGCGCTACGAAGAGATGGTCGAGTTCATGGAGAAGGTCTCTGCCGCCGTCGAGAAGGACGAGCTTACCGTTGAAGAGAGGAATCTCCTCTCTGTTGCCTACAAGAACGTCATCGGTGCTCGCCGTGCCTCCTGGCGTATCATTTCCTCAATCGAGCAGAAGGAGGAGAGCCGAGGGAACGAGGATCATGTCTCCATGATCCGCGACTACCGATCCAAGATCGAGGGTGAGCTATCCAACATCTGCGATGGGATTCTCAAGCTCCTCGACACTCGCCTTATCCCTTCCGCTTCTGCCGGCGATTCCAAGGTCTTTTATCTCAAGATGAAGGGCGATTACCATAGGTACCTTGCCGAGTTCAAGACGGGAGCCGAGCGCAAGGAGGCTGCCGAGAGCACTCTCACTGCTTACAAATCTGCTCAGGATATTGCAAATGCCGAACTGCCTCCGACTCATCCGATTAGACTCGGTCTTGCTTTGAACTTTTCTGTCTTCTACTATGAGATTCTTAACTCTCCGGACCGTGCTTGCAACCTTGCAAAACAGGCCTTTGATGAGGCAATAGCTGAATTGGATACACTGGGAGAGGAATCATACAAGGATAGCACTTTGATCATGCAACTTCTTCGCGATAACCTTACCCTCTGGACCTCTGACATGCAGGTAATGTTATTGAGTTTTGCCATACCCCTCTGGATCTCATCACTTTATTACATGATTAAAGTTTACTTAACCTGTTTGTTAATTTGGTTTCATTTTGTGATCGGATTTCAGGAAGAGGGAGCAGACGAAATCAAAGAAGCAGCAGCTGCTCCTAAACCTGACGAGGAAAAGCAGTAA	909	0.4972	MAAATAPSPREEFVYMAKLAEQAERYEEMVEFMEKVSAAVEKDELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSMIRDYRSKIEGELSNICDGILKLLDTRLIPSASAGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQVMLLSFAIPLWISSLYYMIKVYLTCLLIWFHFVIGFQEEGADEIKEAAAAPKPDEEKQ	302

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4424g00033	302	Coils	Coil	16	43	-	-
	Pral4424g00033	302	SUPERFAMILY	14-3-3 protein	9	242	IPR036815	-
	Pral4424g00033	302	Pfam	14-3-3 protein	16	240	IPR023410	-
	Pral4424g00033	302	CDD	14-3-3_plant	10	244	-	-
	Pral4424g00033	302	ProSitePatterns	14-3-3 proteins signature 1.	50	60	IPR023409	-
	Pral4424g00033	302	PANTHER	14-3-3 PROTEIN	10	243	IPR000308	-
	Pral4424g00033	302	SMART	1433_4	10	253	IPR023410	-
	Pral4424g00033	302	ProSitePatterns	14-3-3 proteins signature 2.	222	241	IPR023409	-
	Pral4424g00033	302	PRINTS	14-3-3 protein zeta signature	44	73	IPR000308	-
	Pral4424g00033	302	PRINTS	14-3-3 protein zeta signature	213	242	IPR000308	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4424g00033	Pral-Chr4424	141643	143863	Dispersed/Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4424g00033	1	302	14-3-3 family	AT1G35160	79.208	6.21e-168	466

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4424g00033	K06630		-	qsa:O6P43_015326	456.062

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