Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4423g00003 ATGGCACCCAGTTTCGATTGCGTTTCAAGTCTTCTTTGCACAGAAGACAACATCATATTCGATGATAACGATTACGAGAGTACGGTGGGGATGCCCGATAATTCGTGGCGTCAAACATCCCATCGACTCCACAATCCAAGCCTTTTCTTTGATGATTCAACTGGGTGGCCATTGCAGAGTGATGAGTGTTTGGCGATAATGGTGGAAAAAGAATGCCAGCATATGCCTGCTGGCGATTACCTGAATAAGCTACGGACTGGGGTTTTGGACTCTGGGGCTAGGAAGGAGGCCATTGATTGGATTGAAAAGGTTCGTGCGCATTTCCGTTTTGGACCTCTCTGTGCATATCTATCCATAAACTACATGGATCGCTTCCTGTCTCTATATGAATTACCAGGAAAATCTTGGTCAATGCAATTGCTGGCTGTAGCATGCTTATCTCTCGCAGCCAAACTAGAGGAGAATGAAGTCCCCCTGTGTGTTGATTTGCAGGTGGCTGAATCAAAATTTATATTTGAAGCCAGAACAATCAAGAGAATGGAGCTTCTCATACTTAGTACTCTTAAGTGGAGAATGCAAGCTATCAGCCCTTTCTCCTTCATAGACCACTTCCTAAACAAGATCAATGAAGATCAAACTCCACTAAGATCTTCTGCATCAACATCTATCCAACTTATATTGAATATTGTGAGAGGGATCGACTCATTGGAATTCAAGCCATCAGAAATAGCAGCAGCAGTGGCAATATTTATTGCGGGGGAAGCCCAAGCAGCTGACGCAGAGAAAGCTGTCTCTGTTCTTGCTCAACACGTAGAGAAGGAGAGAGTCCTGAAGTGTTTTGAAGTGGTCCAAGAGTTGTCATCAAACAGCAGCACCAGCAGTTCTTCTGGTGCCTCTGTTCCTCGTAGCCCGATTGGGGTGCTGGATGCAGCATGCTTGAGCTATAAAAGTGATGAAATAGACGGTTCATGTTCAAGTTCTTCACATAATAATAGTCCAGATGCTAAAAGGAGAAAGCTAAACAAAACCTGA 1032 0.4419 MAPSFDCVSSLLCTEDNIIFDDNDYESTVGMPDNSWRQTSHRLHNPSLFFDDSTGWPLQSDECLAIMVEKECQHMPAGDYLNKLRTGVLDSGARKEAIDWIEKVRAHFRFGPLCAYLSINYMDRFLSLYELPGKSWSMQLLAVACLSLAAKLEENEVPLCVDLQVAESKFIFEARTIKRMELLILSTLKWRMQAISPFSFIDHFLNKINEDQTPLRSSASTSIQLILNIVRGIDSLEFKPSEIAAAVAIFIAGEAQAADAEKAVSVLAQHVEKERVLKCFEVVQELSSNSSTSSSSGASVPRSPIGVLDAACLSYKSDEIDGSCSSSSHNNSPDAKRRKLNKT 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4423g00003 343 SUPERFAMILY Cyclin-like 54 192 IPR036915 -
Pral4423g00003 343 ProSitePatterns Cyclins signature. 94 125 IPR006671 -
Pral4423g00003 343 FunFam D2/4-type cyclin 77 188 - -
Pral4423g00003 343 Gene3D - 77 193 - -
Pral4423g00003 343 SMART Cyclin_C_2 195 316 IPR004367 -
Pral4423g00003 343 Pfam Cyclin, N-terminal domain 64 192 IPR006671 -
Pral4423g00003 343 CDD CYCLIN_AtCycD-like_rpt1 93 190 - -
Pral4423g00003 343 FunFam D6-type cyclin 189 281 - -
Pral4423g00003 343 Pfam Cyclin, C-terminal domain 196 294 IPR004367 -
Pral4423g00003 343 PANTHER CYCLINS 61 290 IPR039361 -
Pral4423g00003 343 Gene3D - 65 281 - -
Pral4423g00003 343 SMART cyclin_7 99 186 IPR013763 -
Pral4423g00003 343 MobiDBLite consensus disorder prediction 319 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4423g00003 Pral-Chr4423 21629 23850 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4423g00003 67 319 Core Cell Cycle Gene Families AT2G22490 48.134 5.37e-76 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4423g00003 K18810 - cave:132189916 422.165