Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4423g00002 ATGGCACCCAGTTTCGATTGCGTTTCAAGTCTTCTTTGCACAGAAGACAACATCATATTCGATGATAACGATTACGAGAGTACGGTGGGGATGCCCGATAATTCGTGGCGTCAAACATCCCATCGACTCCACAATCCAAGCCTTTTCTTTGATGATTCAACTGGGTGGCCATTGCAGAGTGATGAGTGTTTGGCGATAATGGTGGAAAAAGAATGCCAGCATATGCCTGCTGGCGATTACCTGAATAAGCTACGGACTGGGGTTTTGGACTCTGGGGCTAGGAAGGAGGCCATTGATTGGATTGAAAAGGTTCGTGCGCATTTCCGTTTTGGACCTCTCTGTGCATATCTATCCATAAACTACATGGATCGCTTCCTGTCTCTATATGAATTACCAAAGGGAAAATCTTGGTCAATGCAATTGCTGGCTGTAGCATGCTTATCTCTCGCAGCCAAACTAGAGGAGAATGAAGTCCCCCTGTGTGTTGATTTGCAGGTGGCTGAATCAAAATTTATATTTGAAGCCAGAACAATCAAGAGAATGGAGCTTCTCATACTTAGTACTCTTAAGTGGAGAATGCAAGCTATCAGCCCTTTCTCCTTCATAGACCACTTCCTAAACAAGATCAATGAAGATCAAACTCCACTAAGATCTTCTGCATCAACATCTATCCAACTTATATTGAATATTGTGAGAGGGATCGACTCATTGGAATTCAAGCCATCAGAAATAGCAGCAGCAGTGGCAATATTTATTGCGGGGGAAGCCCAAGCAGCTGACGCAGAGAAAGCTGTCTCTGTTCTTGCTCAACACGTAGAGAAGGAGAGAGTCCTGAAGTGTTTTGAAGTGGTCCAAGAGTTGTCATCAAACAGCAGCACCAGCAGTTCTTCTGGTGCCTCTGTTCCTCGTAGCCCGATTGGGGTGCTGGATGCAGCATGCTTGAGCTATAAAAGTGATGAAATAGACGGTTCATGTTCAAGTTCTTCACATAATAATAGTCCAGATGCTAAAAGGAGAAAGCTAAACAAAACCTGA 1035 0.4415 MAPSFDCVSSLLCTEDNIIFDDNDYESTVGMPDNSWRQTSHRLHNPSLFFDDSTGWPLQSDECLAIMVEKECQHMPAGDYLNKLRTGVLDSGARKEAIDWIEKVRAHFRFGPLCAYLSINYMDRFLSLYELPKGKSWSMQLLAVACLSLAAKLEENEVPLCVDLQVAESKFIFEARTIKRMELLILSTLKWRMQAISPFSFIDHFLNKINEDQTPLRSSASTSIQLILNIVRGIDSLEFKPSEIAAAVAIFIAGEAQAADAEKAVSVLAQHVEKERVLKCFEVVQELSSNSSTSSSSGASVPRSPIGVLDAACLSYKSDEIDGSCSSSSHNNSPDAKRRKLNKT 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4423g00002 344 CDD CYCLIN_AtCycD-like_rpt1 93 191 - -
Pral4423g00002 344 PANTHER CYCLINS 61 291 IPR039361 -
Pral4423g00002 344 Pfam Cyclin, C-terminal domain 197 295 IPR004367 -
Pral4423g00002 344 SMART cyclin_7 99 187 IPR013763 -
Pral4423g00002 344 MobiDBLite consensus disorder prediction 320 344 - -
Pral4423g00002 344 ProSitePatterns Cyclins signature. 94 125 IPR006671 -
Pral4423g00002 344 Gene3D - 65 282 - -
Pral4423g00002 344 SUPERFAMILY Cyclin-like 54 193 IPR036915 -
Pral4423g00002 344 Pfam Cyclin, N-terminal domain 64 193 IPR006671 -
Pral4423g00002 344 SMART Cyclin_C_2 196 317 IPR004367 -
Pral4423g00002 344 FunFam D2/4-type cyclin 77 189 - -
Pral4423g00002 344 FunFam D6-type cyclin 190 282 - -
Pral4423g00002 344 Gene3D - 77 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4423g00002 Pral-Chr4423 21629 23850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4423g00002 67 320 Core Cell Cycle Gene Families AT2G22490 48.507 1.75e-78 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4423g00002 K18810 - cave:132189916 428.713