Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4421g00002 ATGAAGCAGTTGATTCGCCGGCTCGCTCGAGTCGCTGATTCGTCTCAGTACAGTCTGCTCCGATCCGAGTCGCGCCACCGGCGGCCGCGCCTGTCACAGTCATTCCGATTGGTGGCGTCTTCCAAGCTTCGGCGATCGCATACGGTGCCGGAAGGTCACGTGCCGGTCTACGTAGGTGATGAGATGGAGAGATTCGTGGTCAGCGCGGAGCTTCTGAACCACCCGATCTTCGTGAAGCTTCTGAACAAATCGGCGCAGGAGTACGGGTACGAGCAGCCAGGCGTGCTTCGAATTCCCTGTCACGTCTTCGTCTTCGAGCGCGTCCTCGAAGCGCTCCGTCTCGGCCTCGACCATGACGACGACGACGCGCGTGACATCCACGACCTCCTGGGCTCTCCTTCCTCTGAAGACTTTTGCTAG 420 0.6 MKQLIRRLARVADSSQYSLLRSESRHRRPRLSQSFRLVASSKLRRSHTVPEGHVPVYVGDEMERFVVSAELLNHPIFVKLLNKSAQEYGYEQPGVLRIPCHVFVFERVLEALRLGLDHDDDDARDIHDLLGSPSSEDFC 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4421g00002 139 Pfam Auxin responsive protein 8 112 IPR003676 GO:0009733
Pral4421g00002 139 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4421g00002 Pral-Chr4421 18855 19824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4421g00002 47 123 Calmodulin-binding Proteins AT5G20810 40.506 1.51e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4421g00002 K14488 - qsa:O6P43_001206 187.963