Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral440g00001 ATGGCTGCTTGCGACAAGAAGAAGGTTGTGTTCATCATGGGATCAACTGGAACAGGAAAAACCAAGCTTTCAATCGACCTGGGCTCACATTTCCCCTCTCAAATCATCAACGCTGACAAGATCCAAGTGTACAAAGGTCTGGACATAATCACCAACAAGGTCCCGGAATCCGAGCGAAGAGGAATCCCACATCACCTCCTGGGAATCATCGAAGATCCCGAATTCGACTACTCTCCCACCCTTTTCTGCGACCATGTCATCTCTGCGATCGAACACATCTCCCAACAAGGACACCTTCCCATCATCGTCGGAGGCTCCAACACTTACCTAGAATACCTTGTGGAAGATCCCACCTTGGACTTTCGTTCCAAACATGATTGTTGCTTCCTCTGGCTCGACGTGTCTCTTGATGTCCTCTTTCCCTATCTGGACAAAAGGGTCGATGAAATGGCGGACGCAGGGTTTGTGGATGAGACCAGAGAATACTTCCTTCCTGAGGTTGATTATTCTGCTGGAATAAGAAGAGCCATCGGCGCTCCTGAACTGCACGAGTATTTTAAGGTTGAGAACGATGTTAATGTGGACGATGAAACCAAACAAGAGTTGCTCAGAGATGCCATGCAGAGAATGAAAGAGAACACTCATACGCTGGCTAGAGTGCAACTTTCAAAGATACAACGCATCAATGATGAGCGTTCTTGGGGATTGAATCGTATTGATGCTACTGAGGTATTTGAGGCTGTTCTGAATGGAAGTGCGTATCAGAGTTTATGGAAAGATTTGGTTTTCAATCCCAGCAAACAGATTGTTCAGAGCTTCCTTGAAGCCTATATGAGTGAGAGCAAAGCTGCAGAATAA 858 0.4627 MAACDKKKVVFIMGSTGTGKTKLSIDLGSHFPSQIINADKIQVYKGLDIITNKVPESERRGIPHHLLGIIEDPEFDYSPTLFCDHVISAIEHISQQGHLPIIVGGSNTYLEYLVEDPTLDFRSKHDCCFLWLDVSLDVLFPYLDKRVDEMADAGFVDETREYFLPEVDYSAGIRRAIGAPELHEYFKVENDVNVDDETKQELLRDAMQRMKENTHTLARVQLSKIQRINDERSWGLNRIDATEVFEAVLNGSAYQSLWKDLVFNPSKQIVQSFLEAYMSESKAAE 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral440g00001 285 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 136 236 - -
Pral440g00001 285 FunFam Adenylate isopentenyltransferase 5, chloroplastic 136 236 - -
Pral440g00001 285 Pfam IPP transferase 123 223 - -
Pral440g00001 285 Pfam IPP transferase 42 116 - -
Pral440g00001 285 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 6 274 IPR039657 -
Pral440g00001 285 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 194 IPR027417 -
Pral440g00001 285 Gene3D - 6 274 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral440g00001 Pral-Chr440 928 1785 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral440g00001 123 276 C2H2 Transcription Factor Family AT2G27760 30.168 2.02e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral440g00001 K10760 - gmx:100817288 360.533