Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4408g00030 ATGGCTTCTACTTCCAATGGAGTTTCTGTTCTCTTTTTCACTTCCTTTCTTCTTCTTCTTCTTCTTCAGGTTTCCTTCATCCATGCCTCTTGTCTTCACTGTGCAGCAGACTCTTCTTCTTCTTCATCCTCCTCCTGCTCCAACTCCAATAATAATAGGCTTCCTTTAGTGAATGGACTCTCATGGAGTTTCTACGAATCAAGCTGTCCCAACGTTAAATTTCTCATCAGATCACACCTCAAGAAGGTCTTCACAAATGACATTGGCCTCGCCGCTGGCTTGCTTCGCCTTCATTTCCATGATTGCTTCGTTCAGGGTTGTGACGGGTCGGTGTTACTGGATGGATCAGCAAGTGGGCCAAGCGAGAAGGAGGCACCACCGAACCTGAGCTTGAGAGCTCAGGCTTTCAAGATCATCGAAGACCTCAGAGCTCTCGTCCACCACCACTGTGGAAGCGTCGTCTCTTGCGCTGACATCGTCGCTGTCGCCGCTCGTGACTCCGTTTTCCTGTCTGGAGGACCAGAGTATGAAGTTCCGTTGGGAAGACGAGATGGCCTGACATTCGCCACAAGAAACGCGACATTGGCGAACCTCCCGGCGCCGACCAGCAACGCCGGAGTCATCCTCGAGTCATTGGCCACGAAAGGCTTCGACCCGACAGATGTTGTTGCCCTCTCCGGCGGCCATACCATCGGCATCAGCCACTGTACTTCCTTCACCAATAGGCTTTACCCTAACCAGGACCCTGTCATGGACCAGACCTTCGCCGACAAACTTAAGCTCACCTGCCCCACCGCGAACACCACCAACACCACCGTGATCGACCTCCGAACACCTGACTTGTTCGACAACAAGTACTATGTGGACCTCGTGAACCGACAGGGACTCTTCACCTCGGACCAGGACTTGTTCACTGACGAGAGGACGAAGGAGATTGTGACAGAATTTGCTGAGAACCAGAGCCTTTTCTTCGATAAGTTTGCGGACGCTGTGGTGAAGATGGGTCAGCTGGGGGTGTTGACAGGTAATAATGGAGAGATCCGAAGAAATTGCTCAGTGAGGAACCAGGATTGCGAATCTTTCTTACGGATGTACCAGGTCGAGGATGCTGTGGAAGACAGGTCGGAGCTGTGA 1134 0.5194 MASTSNGVSVLFFTSFLLLLLLQVSFIHASCLHCAADSSSSSSSSCSNSNNNRLPLVNGLSWSFYESSCPNVKFLIRSHLKKVFTNDIGLAAGLLRLHFHDCFVQGCDGSVLLDGSASGPSEKEAPPNLSLRAQAFKIIEDLRALVHHHCGSVVSCADIVAVAARDSVFLSGGPEYEVPLGRRDGLTFATRNATLANLPAPTSNAGVILESLATKGFDPTDVVALSGGHTIGISHCTSFTNRLYPNQDPVMDQTFADKLKLTCPTANTTNTTVIDLRTPDLFDNKYYVDLVNRQGLFTSDQDLFTDERTKEIVTEFAENQSLFFDKFADAVVKMGQLGVLTGNNGEIRRNCSVRNQDCESFLRMYQVEDAVEDRSEL 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4408g00030 377 PANTHER - 30 355 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 FunFam Peroxidase 199 334 - -
Pral4408g00030 377 Pfam Peroxidase 77 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 PRINTS Plant peroxidase signature 69 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 PRINTS Plant peroxidase signature 172 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 PRINTS Plant peroxidase signature 289 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 PRINTS Plant peroxidase signature 93 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 PRINTS Plant peroxidase signature 273 288 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 PRINTS Plant peroxidase signature 153 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 PRINTS Plant peroxidase signature 329 342 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 PRINTS Plant peroxidase signature 134 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 PRINTS Plant peroxidase signature 220 232 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 ProSiteProfiles Plant heme peroxidase family profile. 59 355 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 SUPERFAMILY Heme-dependent peroxidases 55 357 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 ProSitePatterns Peroxidases proximal heme-ligand signature. 221 231 IPR019793 -
Pral4408g00030 377 ProSitePatterns Peroxidases active site signature. 91 102 IPR019794 GO:0004601
Pral4408g00030 377 Gene3D - 64 352 - -
Pral4408g00030 377 PRINTS Haem peroxidase superfamily signature 172 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 PRINTS Haem peroxidase superfamily signature 221 236 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 PRINTS Haem peroxidase superfamily signature 275 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 PRINTS Haem peroxidase superfamily signature 91 105 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 PRINTS Haem peroxidase superfamily signature 154 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00030 377 CDD secretory_peroxidase 59 353 IPR033905 GO:0004601|GO:0042744
Pral4408g00030 377 FunFam Peroxidase 63 212 - -
Pral4408g00030 377 Gene3D Peroxidase, domain 2 200 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4408g00030 Pral-Chr4408 753184 755082 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4408g00030 55 373 Peroxidase AT1G71695 63.636 1.54e-154 437
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4408g00030 K00430 - mof:131162895 488.419