Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4408g00028 ATGGCTTCATCACTGTCCACTTTGGTTTTGTTGAGTTCATTTGTATTATTATCATATTTCCAAGCCTCTGAGGCACAAGCCCCTCCCCCTATAGTGAAGGGACTGTCTTGGACTTTCTACCAATCAAGCTGTCCCCAGCTTGAGTCTTTAGTCAGAAACCATCTTAGGAAGGTCTTTAAGAGGGACATCGGCCAGGCTGCCGGCATCGTCCGCATCTTCTTCCACGACTGCTTCGTTCAGGGATGCGATGGATCGGTGTTGCTGGACGCAGTATCGCCTAATGATCAGAGCGAGAAGGACACCCCTCCAAACGTGACCTTAAGGCCAGAGGCGTTGCAGACTATTGAAGATCTTCGAGCTCTGATTCATAAGAAGTGTGGAAGAGTCGTCTCTTGCTCTGATCTCACTGTCCTTGCAGCTCGTGAAGCTGTCTTCTTGTCCGGAGGGCCCAATTTTCCGGTACCACTAGGAAGGCGGGACAGTCTTAACTTCAGCGTCGCCGGAACCAACAACCTGCCGGGCCCATTCAGCTCCACCGGCGGCCTTCTCAGCGCTTTCGGTGACCAAAACTTCGATGCCACGGACGTCGTCGCTCTCTCCGGCGCCCACACCTTCGGCCGTTCCCACTGTGGCGCTTTCTTCGGCCGCATCTCCCCCACCGTCGATCGCACCATGGACTCTTCCTTCGCCGCCTCCCTGAAGGCCATTTGCCCCGCCGCCTCCTCCCCCAACACGGCCAACCTCGACGTCCGAACCCCCAACATCTTTGACAACCAGTACTACGTCGACCTCATGAACCGGCAAGGCCTCTTTGTCTCCGACCAGGATCTGTTCACTGATGCCAGAACCAAGAGCATCGTCGTCAGCTTCGCTAAGAATCAAAAGTTGTTCTTTGACAAGTTTTCTCAGGCCATGATCAAGATGAGTCAGCTGAGTGTGTTGACGGGGAAGCAAGGGGAGATTCGAAACAAGTGCTCCGCCACCAACGGCAGAAAGACGACGTCCTCTGTGTTGTCGGCGGTGGTGGAAGACGTTGAGGAGTTGACTCAGTTTTAA 1056 0.5417 MASSLSTLVLLSSFVLLSYFQASEAQAPPPIVKGLSWTFYQSSCPQLESLVRNHLRKVFKRDIGQAAGIVRIFFHDCFVQGCDGSVLLDAVSPNDQSEKDTPPNVTLRPEALQTIEDLRALIHKKCGRVVSCSDLTVLAAREAVFLSGGPNFPVPLGRRDSLNFSVAGTNNLPGPFSSTGGLLSAFGDQNFDATDVVALSGAHTFGRSHCGAFFGRISPTVDRTMDSSFAASLKAICPAASSPNTANLDVRTPNIFDNQYYVDLMNRQGLFVSDQDLFTDARTKSIVVSFAKNQKLFFDKFSQAMIKMSQLSVLTGKQGEIRNKCSATNGRKTTSSVLSAVVEDVEELTQF 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4408g00028 351 PANTHER - 12 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 SUPERFAMILY Heme-dependent peroxidases 29 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Pral4408g00028 351 Gene3D Peroxidase, domain 2 174 309 - -
Pral4408g00028 351 FunFam Peroxidase 173 308 - -
Pral4408g00028 351 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 PRINTS Haem peroxidase superfamily signature 195 210 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 Pfam Peroxidase 51 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 FunFam Peroxidase 38 180 - -
Pral4408g00028 351 ProSiteProfiles Plant heme peroxidase family profile. 34 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 ProSitePatterns Peroxidases proximal heme-ligand signature. 195 205 IPR019793 -
Pral4408g00028 351 CDD secretory_peroxidase 34 328 IPR033905 GO:0004601|GO:0042744
Pral4408g00028 351 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 PRINTS Plant peroxidase signature 194 206 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral4408g00028 351 Gene3D - 38 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4408g00028 Pral-Chr4408 694389 696643 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4408g00028 5 347 Peroxidase AT1G71695 56.734 7.60e-136 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4408g00028 K00430 - gmx:100804126 437.958