Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4408g00027 ATGGATCACATCTTCACCGCCGTCGTCGCCGCCGTCATTAGCTTCTTCACCATCACCCTCATCTTCGCCGCCATCATCCTCGTCTGCAAAAGCAACACCAAGACCCATCCTCGTCGGCGTCAAAACCGTGGTCAGACTCAGAATCGGACCCAGCCGGAGCTATCCTCCATCGTCGTCGACGGTAGCTGGTCGTTCGATCCCTACGTTCAGATCACCTTGCACGAGATCACTAGAGCTACTAAGAACTTCTCACCCGATCTCATCATCGGCGACGGCAGCTTCGGCCTCGTCTATAAAGCGTGTCTCTCCAACGGCCTCGTCGTCGCCATCAAGAAGCTCTCGCCGGACGCATTCCAAGGATTTCGTGAATTCCGCGCCGAGATGGAAACCCTAACTAAGCTCCGACATCCCAATATCGTCAAAATTCTCGGGTACTGGGCAGCGGCTCAGGAGAGAATGTTGGTCTACGAGTTCATGGAGAGAGGGAATCTTGATCAATGGCTTCACGATCCGACGATGTCATCGTCGTCTCGAAACGACGACGTTTCCATGCCAAGGGTTCCTCTCTCGTGGGAGCTGAGGTTCAAGATTGTCAGAGGCATAGCTAATGGGCTCTCTTACTTACATGGGCTGGACAAGCCCATTATTCACAGAGACATCAAAGCCAGTAACGTGTTGCTGGACTCTGACTTCGAGGCCCATATTGCTGATTTCGGGCTCGCGAGAAGGATTGACACTTCAAACTCTCACGTGTCGACTCAGTTCGCCGGAACTATGGGATACATGCCGCCGGAGTACCGAGATGGGGTGAATGTTGCTAACGTGAAGGTGGACGTCTACAGTTTCGGAGTTTTAATGTTGGAAACCGCGACGGGCAGGCGGCCCAATCTGTCCGTGAGGGTTGAGAAGAGGGACATGGGCCTCGTTCAATGGGCCAGGAAAATGGTGGACGAGGACTGTCAAATGGAAATGGTTGATTCCAATATTCCGAGAGAAGGAATGAGCGAAGATAATGTAAAGGAGTACTTTAGGATTGCTTGGATGTGCACAAGTGAATTACAGAAAGACAGACCTGTGATGCAACAGGTTGTGGAATTGTTGGAGAAGATGGCTGAGTAA 1119 0.5183 MDHIFTAVVAAVISFFTITLIFAAIILVCKSNTKTHPRRRQNRGQTQNRTQPELSSIVVDGSWSFDPYVQITLHEITRATKNFSPDLIIGDGSFGLVYKACLSNGLVVAIKKLSPDAFQGFREFRAEMETLTKLRHPNIVKILGYWAAAQERMLVYEFMERGNLDQWLHDPTMSSSSRNDDVSMPRVPLSWELRFKIVRGIANGLSYLHGLDKPIIHRDIKASNVLLDSDFEAHIADFGLARRIDTSNSHVSTQFAGTMGYMPPEYRDGVNVANVKVDVYSFGVLMLETATGRRPNLSVRVEKRDMGLVQWARKMVDEDCQMEMVDSNIPREGMSEDNVKEYFRIAWMCTSELQKDRPVMQQVVELLEKMAE 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4408g00027 372 Gene3D Transferase(Phosphotransferase) domain 1 159 372 - -
Pral4408g00027 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 215 227 IPR008271 GO:0004672|GO:0006468
Pral4408g00027 372 SUPERFAMILY Protein kinase-like (PK-like) 64 368 IPR011009 -
Pral4408g00027 372 ProSitePatterns Protein kinases ATP-binding region signature. 89 112 IPR017441 GO:0005524
Pral4408g00027 372 Pfam Protein tyrosine and serine/threonine kinase 89 367 IPR001245 GO:0004672|GO:0006468
Pral4408g00027 372 FunFam Phytosulfokine receptor 2 45 158 - -
Pral4408g00027 372 FunFam Phytosulfokine receptor 2 159 371 - -
Pral4408g00027 372 ProSiteProfiles Protein kinase domain profile. 83 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4408g00027 372 PIRSF TyrPK_CSF1-R 2 38 - -
Pral4408g00027 372 PIRSF TyrPK_CSF1-R 86 186 - -
Pral4408g00027 372 PIRSF TyrPK_CSF1-R 170 372 - -
Pral4408g00027 372 CDD STKc_IRAK 89 370 - -
Pral4408g00027 372 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 370 - -
Pral4408g00027 372 Gene3D Phosphorylase Kinase; domain 1 43 158 - -
Pral4408g00027 372 SMART serkin_6 83 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4408g00027 Pral-Chr4408 611844 613745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4408g00027 67 370 Receptor kinase-like Gene Family AT5G07280 45.246 6.97e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pral4408g00027 PK_Tyr_Ser-Thr 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4408g00027 - - mtr:11410577 490.73