Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4408g00023 ATGCTAGGGTTTAATGAGGCTTCGCTCTGGGTCGCCACTTCGCCGCAGAACAACTTCAGGAGTCAGGAGGGGAGAAGGATGTCGCACAGGAAGTTCGAACACCCCAGGCATGGTTCTCTGGGATTTCTCCCCAGGAAACGTGCTGCTCGTCACAGGGGAAAAGTGAAGGCGTTCCCCAAGGATGACCCAAGCAAGCCACCCAAGCTTACTGCCTTCATGGGTTACAAGGCAGGCATGACTCACATTGTTAGAGAGGTGGAGAAACCAGGGTCAAAACTCCACAAGAAGGAAACCTGCGAACCAGTTACAATTATTGAGACACCACCCATGGTTATTGTTGGAGTTGTGGGTTATGTGAAAACTCCTCGTGGTCTGCGGACATTGGGCACTGTATGGGCTCAGCATTTGAGTGAGGATGTGAAGCGAAGGTTCTATAAGAATTGGTGCAAGTCCAAGAAGAAGGCTTTCACAAAGTACTCCAAGCAGTTTGAATCTGAAGAAGGGAAGAAAAGCATTCAGGCTCAGCTTGAGAAAATGAAGAAGTATGCATCGGTCGTTCGCGTTTTGGCTCACACCCAGATTAGGAAAATGAAAGGGTTGAAGCAGAAGAAAGCACACCTCATGGAGATTCAGGTCAATGGTGGTACAATTGCACAGAAGGTGGACTACGCTTACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCTGTGTTCCAGAAGGATGAGATGATTGATCTCATTGGTGTCACAAAGGGTAAAGGGTATGAAGGTGTTGTCACTCGTTGGGGTGTGACCCGGCTTCCCCGCAAGACTCACAGGGGTCTGAGGAAAGTTGCTTGTATTGGTGCCTGGCATCCTGCCAGAGTTTCTTTCACGGTTGCCAGAGCTGGTCAGAATGGATACCACCACCGCACAGAGTTGAACAAGAAGGTTTACAAGCTTGGCAAAGCAGGAGACGAGTCCCACGTGGCTATTACTGATTTTGACAGGACTGAGAAGGACATAACACCAATGGGTGGCTTCCCTCACTATGGTATTGTGAAGGATGACTATGTGATGATCAAGGGGTGCTGTGTTGGTCCCAAGAAGAGGGTTATCACATTGCGCCAATCCCTCCTTAAGCAGACTTCTCGTGTTGCTCTGGAGGAGATCAAGCTCAAGTTTATTGACACATCATCCAAGTTTGGCCATGGTCGCTTCCAGACAACACAGGAGAAGCAAAAGTTCTTTGGTCGTCTCAAGGCATAA 1248 0.4864 MLGFNEASLWVATSPQNNFRSQEGRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPKLTAFMGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEDVKRRFYKNWCKSKKKAFTKYSKQFESEEGKKSIQAQLEKMKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYNFFEKQVPVDAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHVAITDFDRTEKDITPMGGFPHYGIVKDDYVMIKGCCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4408g00023 415 FunFam Ribosomal protein L3 291 415 - -
Pral4408g00023 415 Gene3D Translation factors 70 411 - -
Pral4408g00023 415 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 27 410 IPR045077 GO:0003735|GO:0005840|GO:0006412
Pral4408g00023 415 FunFam 60S ribosomal protein L3 252 300 - -
Pral4408g00023 415 FunFam 60S ribosomal protein L3 27 100 - -
Pral4408g00023 415 ProSitePatterns Ribosomal protein L3 signature. 238 261 IPR019926 -
Pral4408g00023 415 Gene3D - 109 233 - -
Pral4408g00023 415 FunFam 60S ribosomal protein L3 109 233 - -
Pral4408g00023 415 Pfam Ribosomal protein L3 27 396 IPR000597 GO:0003735|GO:0005840|GO:0006412
Pral4408g00023 415 SUPERFAMILY Translation proteins 30 396 IPR009000 -
Pral4408g00023 415 Gene3D Ribosomal protein L3, domain 3 27 300 IPR044892 -
Pral4408g00023 415 FunFam 60S ribosomal protein L3 70 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4408g00023 Pral-Chr4408 343570 346521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4408g00023 27 413 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 86.047 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4408g00023 K02925 K10999 gmx:100806786 762.681