Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4408g00021 ATGGGTAAGGAGAGGAGAAGGATGTCGCACAGGAAGTTCGAACACCCCAGGCATGGTTCACTGGGATTTCTCCCCAGGAAGCGTGCTGCTCGTCACAGGGGAAAAGTGAAGGCGTTTCCCAAGGATGACCCAAGCAAGCCACCCAAGCTTACCGCCTTCTTGGGTTACAAGGCAGGAATGACTCACATTGTGAGAGAAGTCGAGAAGCCTGGGTCTAAACTTCATAAGAAGGAAACTTGCGAACCAGTTACAATTATTGAGACACCACCGATGGTTATTGTTGGAGTTGTGGGTTATGTGAAAACTCCTCGTGGTCTCCGAACATTGGGCACTGTATGGGCTCAGCATTTGAGCGAGGATGTGAAGCGAAGGTTCTATAAGAATTGGTGCAAGTCTAAGAAGAAGGCTTTCACAAAGTACTCCAAGCAGTTTGAATCTGAAGAAGGGAAGAAAAGCATTCAGGCTCAGCTTGAGAAAATGAAGAAGTATGCATCAGTTATTCGTGTTTTGGCTCATACCCAGATTAGGAAAATGAAAGGTTTGAAACAGAAGAAAGCACACCTCATGGAGATTCAGGTCAATGGTGGTACAATTGCACAGAAGGTGGACTATGCATACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCTGTGTTCCAGAAGGATGAGATGATTGATCTCATTGGTGTCACAAAGGGTAAAGGGTATGAAGGTGTTGTCACTCGATGGGGTGTGACCCGTCTTCCCCGCAAGACTCACAGGGGTCTGAGGAAAGTTGCTTGTATTGGTGCATGGCATCCTGCCAGAGTTTCTTTCACGGTTGCCCGAGCTGGTCAGAATGGATACCACCACCGCACAGAGTTGAACAAGAAGGTTTACAAGCTCGGCAAAGCTGGAGACGAGTCCCACGCGGCTATTACTGATTTTGACAGGACTGAGAAGGACATAACACCAATGGGTGGCTTCCCTCACTATGGTATTGTGAAGGATGACTATGTGATGATCAAGGGATGCTGTGTTGGTCCCAAGAAGAGGGTTATCACATTGCGCCAATCCCTCCTTAAACAGACTTCTCGTGTTGCTCTGGAGGAGATCAAGCTCAAGTTTATCGACACATCTTCCAAATTTGGCCATGGCCGCTTCCAGACAACACAGGAGAAGCAAAAGTTCTTCGGACGTCTCAAGGCATAA 1191 0.4736 MGKERRRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPSKPPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLGTVWAQHLSEDVKRRFYKNWCKSKKKAFTKYSKQFESEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYNFFEKQVPVDAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGDESHAAITDFDRTEKDITPMGGFPHYGIVKDDYVMIKGCCVGPKKRVITLRQSLLKQTSRVALEEIKLKFIDTSSKFGHGRFQTTQEKQKFFGRLKA 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4408g00021 396 Pfam Ribosomal protein L3 8 377 IPR000597 GO:0003735|GO:0005840|GO:0006412
Pral4408g00021 396 FunFam 60S ribosomal protein L3 90 214 - -
Pral4408g00021 396 Gene3D Ribosomal protein L3, domain 3 8 281 IPR044892 -
Pral4408g00021 396 Gene3D - 90 214 - -
Pral4408g00021 396 MobiDBLite consensus disorder prediction 1 27 - -
Pral4408g00021 396 Gene3D Translation factors 51 392 - -
Pral4408g00021 396 FunFam 60S ribosomal protein L3 233 281 - -
Pral4408g00021 396 SUPERFAMILY Translation proteins 11 377 IPR009000 -
Pral4408g00021 396 FunFam 60S ribosomal protein L3 51 167 - -
Pral4408g00021 396 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 8 391 IPR045077 GO:0003735|GO:0005840|GO:0006412
Pral4408g00021 396 FunFam 60S ribosomal protein L3 8 81 - -
Pral4408g00021 396 ProSitePatterns Ribosomal protein L3 signature. 219 242 IPR019926 -
Pral4408g00021 396 FunFam Ribosomal protein L3 272 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4408g00021 Pral-Chr4408 322840 337590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4408g00021 8 394 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 86.047 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4408g00021 K02925 K10999 gmx:100806786 766.148